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SRA data
Rv3854c
- c.1307delC
Drug resistance types
0 Sensitive
0 RR-TB
8 HR-TB
7 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
8
lineage2.1
7
lineage4.8
7
lineage4.5
2
lineage4.2.2.1
1
lineage3.1.2.1
1
lineage4.1.1.3;lineage4.8
1
lineage2.2.1.1
1
Showing 1 to 8 of 8 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
28
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11043394
MDR-TB
lineage4.8
None
ERR13281461
MDR-TB
lineage4.8
None
ERR13439885
HR-TB
lineage2.1
None
ERR13439886
HR-TB
lineage2.1
None
ERR2516715
MDR-TB
lineage4.2.2.1
nl
ERR2843486
HR-TB
lineage2.1
None
ERR4828566
HR-TB
lineage2.1
vn
ERR4832040
HR-TB
lineage2.1
None
ERR4832052
HR-TB
lineage2.1
vn
ERR8975812
Pre-XDR-TB
lineage4.8
None
Showing 1 to 10 of 28 entries
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