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SRA data
Rv3854c
- c.1308A>G
Drug resistance types
18 Sensitive
1 RR-TB
2 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
17
lineage4.8
15
La1.7;M.canetti;lineage4.9
1
lineage1.1.1.1;lineage2.2.1
1
lineage1.1.1;lineage2.2.1
1
M.canetti;lineage4.9
1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
1
lineage2.2.1;lineage4.2.2
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
38
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11067883
Sensitive
lineage2.2.1
None
ERR2202611
Sensitive
lineage4.8
None
ERR2202612
Sensitive
lineage4.8
None
ERR2202613
Sensitive
lineage4.8
None
ERR2202614
Sensitive
lineage4.8
None
ERR2202615
Sensitive
lineage4.8
None
ERR2202616
Sensitive
lineage4.8
None
ERR2202617
Sensitive
lineage4.8
None
ERR2202618
Sensitive
lineage4.8
None
ERR6358991
HR-TB
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
None
Showing 1 to 10 of 38 entries
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