Rv3854c - c.1343delA
Drug resistance types
0 Sensitive
0 RR-TB
4 HR-TB
30 MDR-TB
16 Pre-XDR-TB
2 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 38 |
| lineage2.2.1 | 12 |
| lineage3.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.2.1.2.1;lineage2.2.2;lineage4.1.2;lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18591743 | HR-TB | lineage2.2.2 | None | SRR18591744 | MDR-TB | lineage2.2.2 | None | SRR29681255 | Pre-XDR-TB | lineage2.2.2 | None | SRR26387474 | MDR-TB | lineage2.2.2 | None | ERR13284624 | MDR-TB | lineage2.2.2 | None | SRR6256978 | MDR-TB | lineage2.2.2 | ru | SRR18591745 | MDR-TB | lineage2.2.2 | None | ERR13284063 | MDR-TB | lineage2.2.2 | None | SRR26387471 | MDR-TB | lineage2.2.2 | None | SRR25515559 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043658 | MDR-TB | lineage2.2.2 | None | SRR26387473 | MDR-TB | lineage2.2.2 | None | ERR11069075 | MDR-TB | lineage2.2.2 | None | ERR11069054 | MDR-TB | lineage2.2.2 | None | SRR26387475 | MDR-TB | lineage2.2.2 | None | SRR26387498 | MDR-TB | lineage2.2.2 | None | ERR4796923 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284773 | MDR-TB | lineage2.2.2 | None | SRR18591741 | MDR-TB | lineage2.2.2 | None | ERR13284995 | MDR-TB | lineage2.2.2 | None | SRR7585419 | MDR-TB | lineage3.1.2 | None | ERR13284282 | Pre-XDR-TB | lineage2.2.1 | None | SRR18591742 | Pre-XDR-TB | lineage2.2.2 | None | ERR11043495 | MDR-TB | lineage2.2.2 | None | SRR26387495 | MDR-TB | lineage2.2.2 | None | ERR987731 | HR-TB | lineage4.1.1.3 | None | SRR26387472 | MDR-TB | lineage2.2.2 | None | SRR29539680 | Pre-XDR-TB | lineage2.2.1 | None | SRR25515558 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798524 | MDR-TB | lineage2.2.2 | None | ERR025437 | Other | lineage1.2.1.2.1;lineage2.2.2;lineage4.1.2;lineage4.2.2 | None | SRR25515464 | Pre-XDR-TB | lineage2.2.1 | None | SRR26387496 | MDR-TB | lineage2.2.2 | None | SRR7796667 | Pre-XDR-TB | lineage2.2.2 | None | ERR028623 | HR-TB | lineage2.2.2 | None | SRR14807466 | XDR-TB | lineage2.2.1 | None | ERR11081275 | Pre-XDR-TB | lineage2.2.1 | None | SRR8758892 | MDR-TB | lineage2.2.2 | None | SRR26387499 | MDR-TB | lineage2.2.2 | None | SRR26387494 | MDR-TB | lineage2.2.2 | None | ERR3794366 | Pre-XDR-TB | lineage2.2.1 | None | ERR025439 | HR-TB | lineage2.2.2 | nl | SRR25515436 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832418 | MDR-TB | lineage2.2.1 | None | ERR11083136 | MDR-TB | lineage2.2.2 | None | ERR4872344 | XDR-TB | lineage2.2.1 | None | SRR26387470 | MDR-TB | lineage2.2.2 | None | ERR4195671 | Pre-XDR-TB | lineage2.2.2 | None | SRR29681403 | Pre-XDR-TB | lineage2.2.2 | None | ERR2516143 | Pre-XDR-TB | lineage2.2.2 | es | SRR26387497 | MDR-TB | lineage2.2.2 | None | ERR11081550 | MDR-TB | lineage2.2.2 | None | SRR7796668 | Pre-XDR-TB | lineage2.2.2 | None |
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