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SRA data
Rv3854c
- c.1343delA
Drug resistance types
0 Sensitive
0 RR-TB
4 HR-TB
30 MDR-TB
16 Pre-XDR-TB
2 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.2
38
lineage2.2.1
12
lineage3.1.2
1
lineage1.2.1.2.1;lineage2.2.2;lineage4.1.2;lineage4.2.2
1
lineage4.1.1.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
53
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR025437
Other
lineage1.2.1.2.1;lineage2.2.2;lineage4.1.2;lineage4.2.2
None
ERR025439
HR-TB
lineage2.2.2
nl
ERR028623
HR-TB
lineage2.2.2
None
ERR11043495
MDR-TB
lineage2.2.2
None
ERR11043658
MDR-TB
lineage2.2.2
None
ERR11069054
MDR-TB
lineage2.2.2
None
ERR11069075
MDR-TB
lineage2.2.2
None
ERR11081275
Pre-XDR-TB
lineage2.2.1
None
ERR11081550
MDR-TB
lineage2.2.2
None
ERR11083136
MDR-TB
lineage2.2.2
None
Showing 1 to 10 of 53 entries
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