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SRA data
Rv3854c
- c.1390_1391dupGA
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
1 MDR-TB
21 Pre-XDR-TB
3 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
16
lineage4.3.3
5
lineage2.2.1;lineage3
1
lineage1.2.2.2;lineage2.2.1
1
lineage4.2.2
1
lineage4.7
1
Showing 1 to 6 of 6 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
25
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR13262145
XDR-TB
lineage2.2.1
None
ERR13266515
Pre-XDR-TB
lineage2.2.1
None
ERR13273310
Pre-XDR-TB
lineage4.3.3
None
ERR3287869
MDR-TB
lineage4.3.3
pe
ERR4178158
Pre-XDR-TB
lineage4.3.3
None
ERR4796608
Pre-XDR-TB
lineage2.2.1
in
ERR4796700
Pre-XDR-TB
lineage2.2.1
in
ERR4796743
Pre-XDR-TB
lineage1.2.2.2;lineage2.2.1
in
ERR4796820
XDR-TB
lineage2.2.1
in
ERR4797102
Pre-XDR-TB
lineage2.2.1
in
Showing 1 to 10 of 25 entries
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