Rv3854c - c.2T>C


Drug resistance types
4 Sensitive 0 RR-TB 0 HR-TB 23 MDR-TB 47 Pre-XDR-TB 1 XDR-TB 2 Other
lineage Counts
lineage Count
lineage4.3.4.2 1
lineage4.1.2.1 19
lineage4.3.3 1
lineage4.3.3;lineage2.2.1.1 1
lineage2.2.1.2 38
lineage2.2.1.1 4
lineage3;lineage2.2.1.2;lineage2.2.1.1 1
lineage4;lineage2.2.1.1 1
lineage2.2.1 1
lineage3;lineage2.2.1.2 2
lineage2.2.1.2;lineage1.1.2 1
lineage2.2.2 1
lineage6.1.1 2
lineage3 1
lineage4.1.1.3;lineage2.2.1.2 1
La1.8.1 1
lineage2 1
spoligotype Counts
spoligotype Count
None 77
Geographic prevalence
Country level data for this variant is available for 43 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786883 Sensitive lineage4.3.4.2 None
SRR13870375 Pre-XDR-TB lineage4.1.2.1 None
SRR10808879 Pre-XDR-TB lineage4.1.2.1 None
SRR13870371 Pre-XDR-TB lineage4.1.2.1 None
SRR13870365 Pre-XDR-TB lineage4.1.2.1 None
SRR13870401 Pre-XDR-TB lineage4.1.2.1 None
SRR13870397 Pre-XDR-TB lineage4.1.2.1 None
SRR14802103 Other lineage4.3.3 None
SRR25827705 MDR-TB lineage4.3.3;lineage2.2.1.1 None
SRR25827870 Pre-XDR-TB lineage2.2.1.2 None
SRR25827739 Pre-XDR-TB lineage2.2.1.1 None
SRR25827558 Pre-XDR-TB lineage3;lineage2.2.1.2;lineage2.2.1.1 None
SRR25827524 Pre-XDR-TB lineage4;lineage2.2.1.1 None
SRR22424877 Pre-XDR-TB lineage2.2.1.2 None
SRR25827482 XDR-TB lineage2.2.1 None
SRR25827480 Pre-XDR-TB lineage2.2.1.2 None
SRR25827762 Pre-XDR-TB lineage3;lineage2.2.1.2 None
SRR25827318 Pre-XDR-TB lineage3;lineage2.2.1.2 None
SRR25827613 MDR-TB lineage2.2.1.2 None
SRR25827422 Pre-XDR-TB lineage2.2.1.2;lineage1.1.2 None
ERR751467 MDR-TB lineage4.1.2.1 pe
ERR4812845 Pre-XDR-TB lineage4.1.2.1 None
ERR2184625 Pre-XDR-TB lineage4.1.2.1 None
ERR4813151 Pre-XDR-TB lineage4.1.2.1 None
ERR4813619 Pre-XDR-TB lineage4.1.2.1 None
SRR5341252 MDR-TB lineage2.2.1.2 in
SRR5065371 Pre-XDR-TB lineage2.2.2 vn
ERR1082130 Sensitive lineage6.1.1 gh
ERR2514267 MDR-TB lineage2.2.1.2 None
ERR1082141 Sensitive lineage6.1.1 gh
ERR4797850 Pre-XDR-TB lineage2.2.1.2 in
SRR6046115 Sensitive lineage3 None
ERR4797809 MDR-TB lineage2.2.1.2 in
ERR4797861 Pre-XDR-TB lineage2.2.1.1 in
ERR2516936 MDR-TB lineage2.2.1.2 gb
ERR4798352 Pre-XDR-TB lineage2.2.1.2 in
ERR2516906 MDR-TB lineage2.2.1.2 gb
ERR4797994 Pre-XDR-TB lineage4.1.1.3;lineage2.2.1.2 in
ERR4798170 MDR-TB lineage2.2.1.2 in
ERR4798219 Pre-XDR-TB lineage2.2.1.2 in
ERR4799809 Pre-XDR-TB lineage2.2.1.2 in
ERR4798239 Pre-XDR-TB lineage2.2.1.2 in
ERR4796965 Pre-XDR-TB lineage2.2.1.2 in
ERR4796978 Pre-XDR-TB lineage2.2.1.1 in
ERR4796735 Pre-XDR-TB lineage2.2.1.2 in
ERR4796745 MDR-TB lineage2.2.1.2 in
ERR4799232 Pre-XDR-TB lineage2.2.1.2 in
ERR4796977 MDR-TB lineage2.2.1.2 in
ERR4796881 MDR-TB lineage2.2.1.2 in
ERR4799487 Pre-XDR-TB lineage2.2.1.2 in
ERR4798430 MDR-TB lineage2.2.1.2 in
ERR4798468 MDR-TB lineage2.2.1.2 in
ERR4796765 Pre-XDR-TB lineage2.2.1.2 in
ERR4797322 MDR-TB lineage2.2.1.2 in
ERR4798003 Pre-XDR-TB lineage2.2.1.2 in
ERR4798141 Pre-XDR-TB lineage2.2.1.2 in
ERR4799739 MDR-TB lineage2.2.1.1 in
ERR4812987 Pre-XDR-TB lineage4.1.2.1 pe
ERR4800085 Pre-XDR-TB lineage2.2.1.2 in
ERR4812978 Pre-XDR-TB lineage4.1.2.1 pe
ERR4799727 MDR-TB lineage2.2.1.2 in
ERR4800305 Pre-XDR-TB lineage2.2.1.2 in
ERR3287438 Pre-XDR-TB lineage4.1.2.1 pe
ERR3287345 Pre-XDR-TB lineage4.1.2.1 pe
ERR3287512 MDR-TB lineage4.1.2.1 None
ERR12117937 Pre-XDR-TB lineage4.1.2.1 None
ERR3287447 MDR-TB lineage4.1.2.1 pe
ERR3287880 Pre-XDR-TB lineage4.1.2.1 pe
SRR8600210 Other La1.8.1 None
ERR4796348 Pre-XDR-TB lineage2.2.1.2 None
ERR2514123 MDR-TB lineage2.2.1.2 gb
ERR2512596 MDR-TB lineage2.2.1.2 gb
ERR2513295 MDR-TB lineage2.2.1.2 gb
ERR4797054 Pre-XDR-TB lineage2 None
ERR4800482 MDR-TB lineage2.2.1.2 None
ERR4799343 Pre-XDR-TB lineage2.2.1.2 None
ERR4800628 Pre-XDR-TB lineage2.2.1.2 None