Rv3854c - c.2T>C
Drug resistance types
4 Sensitive
0 RR-TB
1 HR-TB
21 MDR-TB
39 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 1 |
| lineage2.2.1.2 | 35 |
| lineage6.1.1 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.1.2.1 | 19 |
| lineage2 | 1 |
| lineage4.1.1.3;lineage2.2.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 67 |
Geographic prevalence
Country level data for this variant is available for 44 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8600210 | Other | La1.8.1 | None | ERR4797809 | MDR-TB | lineage2.2.1.2 | in | ERR1082130 | Sensitive | lineage6.1.1 | gh | ERR1082141 | Sensitive | lineage6.1.1 | gh | ERR4796348 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4796745 | MDR-TB | lineage2.2.1.2 | in | ERR4796765 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4796881 | MDR-TB | lineage2.2.1.2 | in | ERR4796978 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797322 | MDR-TB | lineage2.2.1.2 | in | ERR3287345 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3287438 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3287447 | MDR-TB | lineage4.1.2.1 | pe | ERR3287512 | MDR-TB | lineage4.1.2.1 | None | ERR3287880 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4796735 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4796965 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4796977 | MDR-TB | lineage2.2.1.2 | in | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797850 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4797861 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797994 | Pre-XDR-TB | lineage4.1.1.3;lineage2.2.1.2 | in | ERR4798003 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4798141 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4798170 | MDR-TB | lineage2.2.1.2 | in | ERR4798219 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4798239 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4798352 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4798430 | MDR-TB | lineage2.2.1.2 | in | ERR4798468 | MDR-TB | lineage2.2.1.2 | in | ERR751467 | MDR-TB | lineage4.1.2.1 | pe | ERR4799232 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4799487 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4799727 | MDR-TB | lineage2.2.1.2 | in | ERR4799739 | MDR-TB | lineage2.2.1.1 | in | ERR4799809 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4800305 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4800482 | MDR-TB | lineage2.2.1.2 | None | ERR4800628 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4799343 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4800085 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR752177 | HR-TB | lineage1.1.1 | th | SRR10808879 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9786883 | Sensitive | lineage4.3.4.2 | None | SRR13870365 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13870375 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13870371 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13870401 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13870397 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR2101574 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR14802103 | Other | lineage4.3.3 | None | SRR22424877 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4813619 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4812978 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4812845 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4812987 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4813151 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2512596 | MDR-TB | lineage2.2.1.2 | gb | ERR2184625 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR5065371 | Pre-XDR-TB | lineage2.2 | vn | ERR2513295 | MDR-TB | lineage2.2.1.2 | gb | ERR2516906 | MDR-TB | lineage2.2.1.2 | gb | ERR2516936 | MDR-TB | lineage2.2.1.2 | gb | ERR2514123 | MDR-TB | lineage2.2.1.2 | gb | ERR2514267 | MDR-TB | lineage2.2.1.2 | None | SRR6046115 | Sensitive | lineage3 | None | SRR5341252 | MDR-TB | lineage2.2.1.2 | in |
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