Rv3854c - c.2T>G


Drug resistance types
0 Sensitive 0 RR-TB 22 HR-TB 215 MDR-TB 35 Pre-XDR-TB 0 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.2.2.2 230
lineage4.2 2
lineage2.2.1 32
lineage2.2 4
lineage4.4.2 1
lineage3 1
lineage4.8;lineage4.2.2.2 1
lineage4.1.4 1
spoligotype Counts
spoligotype Count
None 272
Geographic prevalence
Country level data for this variant is available for 67 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11049567 MDR-TB lineage4.2.2.2 None
ERR6397151 MDR-TB lineage4.2.2.2 None
ERR6397154 MDR-TB lineage4.2.2.2 None
ERR6397199 MDR-TB lineage4.2.2.2 None
ERR6397171 MDR-TB lineage4.2.2.2 None
ERR7732708 MDR-TB lineage4.2.2.2 None
ERR6397213 MDR-TB lineage4.2.2.2 None
ERR2145520 MDR-TB lineage4.2.2.2 None
ERR7732707 MDR-TB lineage4.2.2.2 None
ERR7737645 MDR-TB lineage4.2.2.2 None
ERR7737641 MDR-TB lineage4.2.2.2 None
ERR7737662 MDR-TB lineage4.2.2.2 None
ERR7737656 MDR-TB lineage4.2.2.2 None
ERR7737675 MDR-TB lineage4.2.2.2 None
ERR7737670 MDR-TB lineage4.2.2.2 None
ERR7737647 MDR-TB lineage4.2.2.2 None
ERR7737644 MDR-TB lineage4.2.2.2 None
ERR7737685 MDR-TB lineage4.2.2.2 None
ERR7737682 MDR-TB lineage4.2.2.2 None
ERR7737680 MDR-TB lineage4.2.2.2 None
ERR7737707 MDR-TB lineage4.2.2.2 None
ERR7737722 MDR-TB lineage4.2.2.2 None
ERR7737720 MDR-TB lineage4.2.2.2 None
ERR7737756 MDR-TB lineage4.2.2.2 None
ERR7737727 MDR-TB lineage4.2.2.2 None
ERR7737745 MDR-TB lineage4.2.2.2 None
ERR7737739 MDR-TB lineage4.2.2.2 None
ERR7737776 MDR-TB lineage4.2.2.2 None
ERR7737772 MDR-TB lineage4.2.2.2 None
ERR7737817 MDR-TB lineage4.2.2.2 None
ERR7737806 MDR-TB lineage4.2.2.2 None
ERR7737777 MDR-TB lineage4.2.2.2 None
ERR7737819 MDR-TB lineage4.2.2.2 None
ERR7737836 MDR-TB lineage4.2.2.2 None
ERR7737840 MDR-TB lineage4.2.2.2 None
ERR7737864 MDR-TB lineage4.2.2.2 None
ERR7737851 MDR-TB lineage4.2.2.2 None
ERR7737858 MDR-TB lineage4.2.2.2 None
ERR7737847 MDR-TB lineage4.2.2.2 None
ERR7737842 MDR-TB lineage4.2.2.2 None
ERR7737855 MDR-TB lineage4.2.2.2 None
ERR7737856 MDR-TB lineage4.2.2.2 None
ERR7737879 MDR-TB lineage4.2.2.2 None
ERR7737868 MDR-TB lineage4.2.2.2 None
ERR7737871 MDR-TB lineage4.2.2.2 None
ERR7737896 MDR-TB lineage4.2.2.2 None
ERR7737882 MDR-TB lineage4.2.2.2 None
ERR7737890 MDR-TB lineage4.2.2.2 None
ERR7737906 MDR-TB lineage4.2.2.2 None
ERR7737905 MDR-TB lineage4.2.2.2 None
ERR7737942 MDR-TB lineage4.2.2.2 None
ERR7737919 MDR-TB lineage4.2.2.2 None
ERR7737926 MDR-TB lineage4.2.2.2 None
ERR7737937 MDR-TB lineage4.2.2.2 None
SRR22251454 HR-TB lineage4.2.2.2 None
ERR7737947 MDR-TB lineage4.2.2.2 None
ERR8975137 HR-TB lineage4.2 None
SRR22251828 MDR-TB lineage4.2.2.2 None
ERR7975628 Pre-XDR-TB lineage2.2.1 None
ERR7975641 Pre-XDR-TB lineage2.2.1 None
ERR983236 MDR-TB lineage2.2.1 None
SRR1144758 MDR-TB lineage4.2.2.2 None
ERR983240 MDR-TB lineage2.2.1 None
ERR11050152 MDR-TB lineage4.2.2.2 None
SRR1144760 MDR-TB lineage4.2.2.2 None
SRR1144784 MDR-TB lineage4.2 None
SRR1144814 MDR-TB lineage4.2.2.2 None
SRR1144785 MDR-TB lineage4.2.2.2 None
SRR1146289 MDR-TB lineage4.2.2.2 None
SRR1144833 MDR-TB lineage4.2.2.2 None
SRR1144808 MDR-TB lineage4.2.2.2 None
SRR1146293 MDR-TB lineage4.2.2.2 None
SRR1146320 MDR-TB lineage4.2.2.2 None
SRR1146330 MDR-TB lineage4.2.2.2 None
SRR1146329 MDR-TB lineage4.2.2.2 None
SRR1146309 MDR-TB lineage4.2.2.2 None
SRR1146301 MDR-TB lineage4.2.2.2 None
SRR1162986 MDR-TB lineage4.2.2.2 None
SRR1162874 MDR-TB lineage4.2.2.2 None
SRR1162968 MDR-TB lineage4.2.2.2 None
SRR1162796 MDR-TB lineage4.2.2.2 None
SRR1162800 MDR-TB lineage4.2.2.2 None
SRR1162879 MDR-TB lineage4.2.2.2 None
SRR1163123 MDR-TB lineage4.2.2.2 None
SRR1163085 MDR-TB lineage4.2.2.2 None
SRR1163014 MDR-TB lineage4.2.2.2 None
SRR1163093 MDR-TB lineage4.2.2.2 None
SRR1163128 MDR-TB lineage4.2.2.2 None
SRR1165372 MDR-TB lineage4.2.2.2 None
SRR1163142 MDR-TB lineage4.2.2.2 None
SRR1163179 MDR-TB lineage4.2.2.2 None
SRR1163208 MDR-TB lineage4.2.2.2 None
SRR1163201 MDR-TB lineage4.2.2.2 None
SRR1163413 MDR-TB lineage4.2.2.2 None
SRR1163483 Pre-XDR-TB lineage2.2.1 None
SRR11972309 Pre-XDR-TB lineage2.2.1 None
SRR1166876 MDR-TB lineage4.2.2.2 None
SRR1167061 MDR-TB lineage4.2.2.2 None
SRR1167131 MDR-TB lineage4.2.2.2 None
SRR11972256 Pre-XDR-TB lineage2.2.1 None
SRR11972289 Pre-XDR-TB lineage2.2.1 None
SRR11972292 MDR-TB lineage2.2.1 None
SRR11972288 Pre-XDR-TB lineage2.2.1 None
SRR1165432 MDR-TB lineage4.2.2.2 None
SRR1166925 MDR-TB lineage4.2.2.2 None
SRR11972279 MDR-TB lineage2.2.1 None
SRR11972363 MDR-TB lineage2.2.1 None
SRR11972354 MDR-TB lineage2.2.1 None
SRR11972407 Pre-XDR-TB lineage2.2.1 None
SRR11972355 Pre-XDR-TB lineage2.2.1 None
SRR11972359 Pre-XDR-TB lineage2.2.1 None
SRR11972446 MDR-TB lineage2.2.1 None
SRR11972412 MDR-TB lineage2.2.1 None
SRR11972402 MDR-TB lineage2.2.1 None
SRR21674620 MDR-TB lineage4.2.2.2 None
SRR11972449 MDR-TB lineage2.2 None
SRR18213722 HR-TB lineage4.2.2.2 None
ERR11069128 MDR-TB lineage4.2.2.2 None
ERR11069046 MDR-TB lineage4.4.2 None
ERR11080856 MDR-TB lineage4.2.2.2 None
ERR11069129 MDR-TB lineage4.2.2.2 None
ERR11081192 Pre-XDR-TB lineage2.2.1 None
ERR11080920 MDR-TB lineage4.2.2.2 None
ERR11081050 MDR-TB lineage4.2.2.2 None
ERR11081528 MDR-TB lineage4.2.2.2 None
ERR11082240 MDR-TB lineage4.2.2.2 None
ERR11081695 MDR-TB lineage4.2.2.2 None
ERR11081701 MDR-TB lineage4.2.2.2 None
ERR11082116 MDR-TB lineage4.2.2.2 None
SRR3082080 MDR-TB lineage4.2.2.2 None
SRR3082073 MDR-TB lineage4.2.2.2 None
SRR6045085 Pre-XDR-TB lineage2.2.1 gb
SRR3085334 MDR-TB lineage4.2.2.2 None
SRR3085331 MDR-TB lineage4.2.2.2 None
SRR6045841 HR-TB lineage4.2.2.2 gb
SRR5817463 MDR-TB lineage2.2.1 au
SRR6046111 HR-TB lineage4.2.2.2 gb
ERR1035155 MDR-TB lineage4.2.2.2 sa
SRR2469380 HR-TB lineage4.2.2.2 None
ERR3275716 MDR-TB lineage4.2.2.2 nl
SRR5818595 MDR-TB lineage4.2.2.2 dj
ERR3275847 MDR-TB lineage4.2.2.2 nl
SRR5818577 MDR-TB lineage4.2.2.2 dj
SRR5818581 MDR-TB lineage4.2.2.2 dj
ERR3275385 MDR-TB lineage4.2.2.2 nl
ERR3275476 MDR-TB lineage4.2.2.2 nl
SRR5818638 MDR-TB lineage4.2.2.2 dj
SAMN02414876 MDR-TB lineage4.2.2.2 se
ERR1023410 MDR-TB lineage4.2.2.2 None
ERR1023412 MDR-TB lineage4.2.2.2 None
ERR3275727 MDR-TB lineage4.2.2.2 nl
SAMN02414874 MDR-TB lineage4.2.2.2 se
SAMN02414873 MDR-TB lineage4.2.2.2 se
SAMN02414887 MDR-TB lineage4.2.2.2 se
SAMN02414896 MDR-TB lineage4.2.2.2 se
SRR2100830 Pre-XDR-TB lineage2.2.1 None
SRR2100823 HR-TB lineage4.2.2.2 None
SRR2100342 HR-TB lineage4.2.2.2 None
SRR2100925 MDR-TB lineage4.2.2.2 None
SAMN02414930 MDR-TB lineage4.2.2.2 se
SRR2100878 HR-TB lineage4.2.2.2 None
SAMN02414962 MDR-TB lineage4.2.2.2 se
SAMN02414977 MDR-TB lineage4.2.2.2 se
ERR1023318 HR-TB lineage4.2.2.2 None
SRR23340039 MDR-TB lineage2.2 None
ERR270720 Pre-XDR-TB lineage2.2.1 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
ERR233350 MDR-TB lineage4.2.2.2 et
ERR270707 HR-TB lineage4.2.2.2 None
SRR23340042 MDR-TB lineage2.2 None
SRR23340110 MDR-TB lineage2.2 None
ERR270778 HR-TB lineage4.2.2.2 None
ERR278538 MDR-TB lineage4.2.2.2 None
ERR2446297 MDR-TB lineage4.2.2.2 nl
ERR270713 HR-TB lineage4.2.2.2 None
ERR266608 HR-TB lineage4.2.2.2 None
ERR2446468 MDR-TB lineage4.2.2.2 nl
SRR6045763 Pre-XDR-TB lineage2.2.1 None
ERR11067246 MDR-TB lineage4.2.2.2 None
SRR6045932 MDR-TB lineage4.2.2.2 None
SRR6045244 MDR-TB lineage4.2.2.2 None
SRR6045277 HR-TB lineage4.2.2.2 None
ERR2677447 MDR-TB lineage4.2.2.2 de
ERR2516772 Pre-XDR-TB lineage2.2.1 gb
ERR4822497 MDR-TB lineage4.2.2.2 de
ERR2516806 Pre-XDR-TB lineage2.2.1 gb
ERR4831178 HR-TB lineage4.2.2.2 de
ERR2516914 MDR-TB lineage4.2.2.2 gb
ERR2516962 MDR-TB lineage4.2.2.2 gb
ERR4831209 HR-TB lineage4.2.2.2 de
ERR2517069 MDR-TB lineage4.2.2.2 gb
ERR4830796 Pre-XDR-TB lineage4.2.2.2 None
ERR2516944 MDR-TB lineage4.2.2.2 gb
ERR2517342 MDR-TB lineage4.2.2.2 nl
ERR4830834 MDR-TB lineage4.2.2.2 None
ERR4830809 Pre-XDR-TB lineage4.2.2.2 None
ERR2517379 MDR-TB lineage4.2.2.2 nl
ERR4797016 Pre-XDR-TB lineage3 in
SRR6046574 Pre-XDR-TB lineage2.2.1 None
ERR4828996 MDR-TB lineage4.2.2.2 None
SRR6046530 Pre-XDR-TB lineage2.2.1 None
ERR4830787 MDR-TB lineage4.2.2.2 None
ERR4828993 MDR-TB lineage4.2.2.2 it
ERR1200620 MDR-TB lineage4.2.2.2 et
ERR4829004 MDR-TB lineage4.2.2.2 it
ERR4831240 MDR-TB lineage4.2.2.2 de
ERR4831241 MDR-TB lineage4.2.2.2 de
ERR4822303 MDR-TB lineage4.2.2.2 de
ERR4828989 MDR-TB lineage4.2.2.2 it
ERR4830782 MDR-TB lineage4.2.2.2 et
ERR4830784 MDR-TB lineage4.2.2.2 et
ERR4830794 Pre-XDR-TB lineage4.2.2.2 et
ERR4830798 MDR-TB lineage4.2.2.2 et
ERR4830793 MDR-TB lineage4.2.2.2 et
ERR4830789 Pre-XDR-TB lineage4.2.2.2 et
ERR4830792 MDR-TB lineage4.2.2.2 et
ERR4830785 Pre-XDR-TB lineage4.2.2.2 et
ERR4830797 MDR-TB lineage4.2.2.2 et
ERR4830821 Pre-XDR-TB lineage4.2.2.2 et
ERR4830820 MDR-TB lineage4.2.2.2 et
ERR4830813 MDR-TB lineage4.2.2.2 et
ERR4830826 HR-TB lineage4.8;lineage4.2.2.2 et
ERR4830825 MDR-TB lineage4.2.2.2 et
ERR4830838 Pre-XDR-TB lineage4.2.2.2 et
ERR4830831 Pre-XDR-TB lineage4.2.2.2 et
ERR4830828 Pre-XDR-TB lineage4.2.2.2 et
ERR4830824 Pre-XDR-TB lineage4.2.2.2 et
ERR4829102 Pre-XDR-TB lineage4.2.2.2 dj
ERR4830839 MDR-TB lineage4.2.2.2 et
ERR4830829 MDR-TB lineage4.2.2.2 et
ERR4830840 MDR-TB lineage4.2.2.2 et
ERR11043787 MDR-TB lineage4.2.2.2 None
ERR11042995 MDR-TB lineage4.2.2.2 None
SRR7781506 MDR-TB lineage4.2.2.2 None
ERR11043936 MDR-TB lineage4.2.2.2 None
ERR11044333 MDR-TB lineage4.2.2.2 None
ERR11044007 MDR-TB lineage4.2.2.2 None
ERR11044055 MDR-TB lineage4.2.2.2 None
ERR11044157 MDR-TB lineage4.2.2.2 None
ERR11044024 MDR-TB lineage4.2.2.2 None
ERR11044060 MDR-TB lineage4.2.2.2 None
ERR11044292 Pre-XDR-TB lineage2.2.1 None
ERR11044335 HR-TB lineage4.2.2.2 None
ERR3324346 MDR-TB lineage4.1.4 None
ERR11044337 HR-TB lineage4.2.2.2 None
ERR114495 HR-TB lineage4.2.2.2 None
ERR11044613 MDR-TB lineage4.2.2.2 None
ERR386897 MDR-TB lineage4.2.2.2 None
ERR3639737 Pre-XDR-TB lineage2.2.1 None
ERR3639818 MDR-TB lineage4.2.2.2 None
ERR4011954 MDR-TB lineage4.2.2.2 None
ERR4011960 MDR-TB lineage4.2.2.2 None
ERR4011951 MDR-TB lineage4.2.2.2 None
ERR4011964 MDR-TB lineage4.2.2.2 None
ERR4011965 MDR-TB lineage4.2.2.2 None
ERR4011952 MDR-TB lineage4.2.2.2 None
ERR4011966 Pre-XDR-TB lineage4.2.2.2 None
ERR4011953 MDR-TB lineage4.2.2.2 None
ERR4011961 MDR-TB lineage4.2.2.2 None
ERR4011963 MDR-TB lineage4.2.2.2 None
ERR4011973 MDR-TB lineage4.2.2.2 None
ERR4011962 MDR-TB lineage4.2.2.2 None
ERR4011969 MDR-TB lineage4.2.2.2 None
ERR4011968 MDR-TB lineage4.2.2.2 None
ERR4011974 MDR-TB lineage4.2.2.2 None
ERR4831239 MDR-TB lineage4.2.2.2 None
ERR403414 HR-TB lineage4.2.2.2 None
ERR4276870 MDR-TB lineage4.2.2.2 None
ERR4276911 MDR-TB lineage4.2.2.2 None
ERR4828868 MDR-TB lineage4.2.2.2 None
ERR4828843 MDR-TB lineage4.2.2.2 None
ERR4828871 MDR-TB lineage4.2.2.2 None