Rv3854c - c.2T>G

Drug resistance types
0 Sensitive 0 RR-TB 11 HR-TB 60 MDR-TB 19 Pre-XDR-TB 0 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.1 10
lineage4.2.2.2 75
lineage4.8;lineage4.2.2.2 1
lineage2.2 3
lineage3 1
spoligotype Counts
spoligotype Count
None 90
Geographic prevalence
Country level data for this variant is available for 68 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR6045085 Pre-XDR-TB lineage2.2.1 gb
ERR2516944 MDR-TB lineage4.2.2.2 gb
ERR4830826 HR-TB lineage4.8;lineage4.2.2.2 et
ERR4828843 MDR-TB lineage4.2.2.2 None
SAMN02414962 MDR-TB lineage4.2.2.2 se
SRR23340039 MDR-TB lineage2.2 None
ERR4828989 MDR-TB lineage4.2.2.2 it
SRR23340042 MDR-TB lineage2.2 None
SRR23340110 MDR-TB lineage2.2 None
ERR3275847 MDR-TB lineage4.2.2.2 nl
SRR6045932 MDR-TB lineage4.2.2.2 None
SRR2469380 HR-TB lineage4.2.2.2 None
SRR6046530 Pre-XDR-TB lineage2.2.1 None
SRR6045841 HR-TB lineage4.2.2.2 gb
ERR2516806 Pre-XDR-TB lineage2.2.1 gb
ERR3275727 MDR-TB lineage4.2.2.2 nl
ERR4828871 MDR-TB lineage4.2.2.2 None
ERR1023410 MDR-TB lineage4.2.2.2 None
ERR1200620 MDR-TB lineage4.2.2.2 et
ERR2517069 MDR-TB lineage4.2.2.2 gb
ERR4831239 MDR-TB lineage4.2.2.2 None
ERR4829102 Pre-XDR-TB lineage4.2.2.2 dj
ERR4831178 HR-TB lineage4.2.2.2 de
ERR4830829 MDR-TB lineage4.2.2.2 et
SRR5818638 MDR-TB lineage4.2.2.2 dj
SRR6045537 Pre-XDR-TB lineage2.2.1 None
ERR4830813 MDR-TB lineage4.2.2.2 et
ERR4829004 MDR-TB lineage4.2.2.2 it
SRR2100878 HR-TB lineage4.2.2.2 None
ERR4830798 MDR-TB lineage4.2.2.2 et
ERR4830797 MDR-TB lineage4.2.2.2 et
ERR4830793 MDR-TB lineage4.2.2.2 et
ERR4830825 MDR-TB lineage4.2.2.2 et
ERR3275476 MDR-TB lineage4.2.2.2 nl
ERR4830831 Pre-XDR-TB lineage4.2.2.2 et
ERR4830782 MDR-TB lineage4.2.2.2 et
SRR5818581 MDR-TB lineage4.2.2.2 dj
ERR4828993 MDR-TB lineage4.2.2.2 it
ERR2677447 MDR-TB lineage4.2.2.2 de
ERR4828868 MDR-TB lineage4.2.2.2 None
ERR4830784 MDR-TB lineage4.2.2.2 et
ERR1023412 MDR-TB lineage4.2.2.2 None
ERR2516962 MDR-TB lineage4.2.2.2 gb
SRR6046111 HR-TB lineage4.2.2.2 gb
ERR2517379 MDR-TB lineage4.2.2.2 nl
ERR2446468 MDR-TB lineage4.2.2.2 nl
ERR4830820 MDR-TB lineage4.2.2.2 et
SRR6046574 Pre-XDR-TB lineage2.2.1 None
ERR4822497 MDR-TB lineage4.2.2.2 de
ERR4830789 Pre-XDR-TB lineage4.2.2.2 et
SAMN02414930 MDR-TB lineage4.2.2.2 se
SRR2100925 MDR-TB lineage4.2.2.2 None
ERR4831209 HR-TB lineage4.2.2.2 de
SRR2100830 Pre-XDR-TB lineage2.2.1 None
ERR1035155 MDR-TB lineage4.2.2.2 sa
ERR2446297 MDR-TB lineage4.2.2.2 nl
SAMN02414873 MDR-TB lineage4.2.2.2 se
ERR4830821 Pre-XDR-TB lineage4.2.2.2 et
SRR2100342 HR-TB lineage4.2.2.2 None
ERR8975137 HR-TB lineage4.2.2.2 None
ERR3275716 MDR-TB lineage4.2.2.2 nl
ERR4830838 Pre-XDR-TB lineage4.2.2.2 et
SRR5818577 MDR-TB lineage4.2.2.2 dj
ERR4830840 MDR-TB lineage4.2.2.2 et
ERR4830839 MDR-TB lineage4.2.2.2 et
SAMN02414876 MDR-TB lineage4.2.2.2 se
ERR4831241 MDR-TB lineage4.2.2.2 de
SRR2100823 HR-TB lineage4.2.2.2 None
ERR2516772 Pre-XDR-TB lineage2.2.1 gb
ERR4831240 MDR-TB lineage4.2.2.2 de
ERR4830824 Pre-XDR-TB lineage4.2.2.2 et
ERR4830794 Pre-XDR-TB lineage4.2.2.2 et
ERR4830828 Pre-XDR-TB lineage4.2.2.2 et
ERR1023318 HR-TB lineage4.2.2.2 None
SAMN02414887 MDR-TB lineage4.2.2.2 se
ERR4822303 MDR-TB lineage4.2.2.2 de
ERR4797016 Pre-XDR-TB lineage3 in
ERR3275385 MDR-TB lineage4.2.2.2 nl
ERR2517342 MDR-TB lineage4.2.2.2 nl
SRR5817463 MDR-TB lineage2.2.1 au
ERR4830792 MDR-TB lineage4.2.2.2 et
SAMN02414977 MDR-TB lineage4.2.2.2 se
SAMN02414964 Pre-XDR-TB lineage2.2.1 se
SAMN02414896 MDR-TB lineage4.2.2.2 se
SAMN02414874 MDR-TB lineage4.2.2.2 se
ERR4830785 Pre-XDR-TB lineage4.2.2.2 et
SRR5818595 MDR-TB lineage4.2.2.2 dj
ERR2516914 MDR-TB lineage4.2.2.2 gb
ERR233350 MDR-TB lineage4.2.2.2 et