Rv3854c - c.672_673dupGC


Drug resistance types
0 Sensitive 0 RR-TB 0 HR-TB 15 MDR-TB 25 Pre-XDR-TB 1 XDR-TB 6 Other
lineage Counts
lineage Count
lineage2.2.1 18
lineage4.3.3 7
lineage4.8 11
lineage4 1
lineage4.1.2.1.1 1
lineage2.2.1.1 2
lineage4.1.1.3 2
lineage2.2.2 2
lineage4.1.2.1 1
lineage3 1
lineage2.1 1
spoligotype Counts
spoligotype Count
None 47
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6824463 Pre-XDR-TB lineage2.2.1 cn
ERR4798080 MDR-TB lineage2.2.1 in
ERR133887 Pre-XDR-TB lineage4.3.3 ru
ERR9807026 Pre-XDR-TB lineage2.2.1 None
ERR8665910 Pre-XDR-TB lineage4.3.3 None
SRR10305620 Pre-XDR-TB lineage2.2.1 None
ERR4797748 Pre-XDR-TB lineage4.8 in
SRR24256033 Pre-XDR-TB lineage4.3.3 None
SRR28409614 Other lineage4.8 None
SRR13870364 Pre-XDR-TB lineage4 None
ERR3323715 MDR-TB lineage2.2.1 None
SRR16089670 Other lineage4.8 None
ERR1035245 MDR-TB lineage2.2.1 pt
ERR4821605 Other lineage4.8 None
ERR757163 Pre-XDR-TB lineage4.1.2.1.1 ar
SRR6280334 Pre-XDR-TB lineage2.2.1.1 cn
ERR6866036 MDR-TB lineage4.1.1.3 None
SRR15368722 Pre-XDR-TB lineage2.2.1 None
SRR25827377 Pre-XDR-TB lineage2.2.1 None
ERR275215 MDR-TB lineage2.2.1 pt
SRR22424745 Pre-XDR-TB lineage2.2.1 None
SRR28409731 Other lineage4.8 None
SRR28467059 Pre-XDR-TB lineage2.2.2 None
SRR28393625 MDR-TB lineage4.1.2.1 None
ERR3287855 Pre-XDR-TB lineage4.3.3 pe
ERR1035065 Pre-XDR-TB lineage2.2.1 za
ERR2510409 MDR-TB lineage3 pk
ERR552036 XDR-TB lineage4.3.3 None
SRR1172252 MDR-TB lineage4.8 None
SRR15368719 MDR-TB lineage2.2.1 None
SRR11662677 Pre-XDR-TB lineage2.1 None
SRR22873596 Pre-XDR-TB lineage2.2.2 None
ERR2653070 MDR-TB lineage4.3.3 None
SRR19325551 Other lineage4.8 None
SRR13232675 Pre-XDR-TB lineage4.3.3 None
SRR10380149 Pre-XDR-TB lineage2.2.1 None
SRR1723842 Pre-XDR-TB lineage2.2.1 cn
ERR4024920 MDR-TB lineage4.1.1.3 None
SRR28409732 Other lineage4.8 None
ERR1036277 MDR-TB lineage2.2.1 pt
SAMN02628523 MDR-TB lineage4.8 ir
ERR4797951 Pre-XDR-TB lineage2.2.1 in
SRR6824461 Pre-XDR-TB lineage2.2.1 cn
ERR4799472 Pre-XDR-TB lineage2.2.1 in
SRR1183085 MDR-TB lineage4.8 None
ERR2020089 Pre-XDR-TB lineage2.2.1.1 None
SRR1172151 MDR-TB lineage4.8 None