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SRA data
Rv3854c
- c.672_673dupGC
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
16 MDR-TB
28 Pre-XDR-TB
1 XDR-TB
11 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
20
lineage4.8
17
lineage4.3.3
7
lineage2.2.1.1
2
lineage2.2.2
2
lineage4.1.1.3
2
lineage3
1
lineage4
1
lineage4.3.2
1
lineage2.1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
56
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035065
Pre-XDR-TB
lineage2.2.1
za
ERR1035245
MDR-TB
lineage2.2.1
pt
ERR1036277
MDR-TB
lineage2.2.1
pt
ERR13291093
Pre-XDR-TB
lineage2.2.1
None
ERR13291334
Other
lineage4.8
None
ERR13291346
Other
lineage4.8
None
ERR13291347
Other
lineage4.8
None
ERR13292137
Other
lineage4.8
None
ERR133887
Pre-XDR-TB
lineage4.3.3
ru
ERR2020089
Pre-XDR-TB
lineage2.2.1.1
None
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