Rv3854c - c.672_673dupGC


Drug resistance types
0 Sensitive 0 RR-TB 2 HR-TB 14 MDR-TB 19 Pre-XDR-TB 2 XDR-TB 3 Other
lineage Counts
lineage Count
lineage2.2.1 18
lineage4.8 9
lineage2.2.1.1 1
lineage4.3.3 6
lineage3 1
lineage2.2.2 1
lineage4.1.1.3 2
lineage4.1.2.1.1 1
lineage4 1
spoligotype Counts
spoligotype Count
None 40
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR22424745 Pre-XDR-TB lineage2.2.1 None
SRR19325551 Other lineage4.8 None
SRR6280334 Pre-XDR-TB lineage2.2.1.1 cn
ERR9807026 Pre-XDR-TB lineage2.2.1 None
SAMN02628523 MDR-TB lineage4.8 ir
ERR133887 Pre-XDR-TB lineage4.3.3 ru
ERR552036 XDR-TB lineage4.3.3 None
ERR2653070 MDR-TB lineage4.3.3 None
ERR2510409 MDR-TB lineage3 pk
SRR1723842 Pre-XDR-TB lineage2.2.1 cn
ERR8665910 Pre-XDR-TB lineage4.3.3 None
ERR275215 MDR-TB lineage2.2.1 pt
ERR4821605 Other lineage4.8 None
SRR6824463 Pre-XDR-TB lineage2.2.1 cn
SRR6824461 Pre-XDR-TB lineage2.2.1 cn
SRR6824582 MDR-TB lineage2.2.2 cn
ERR4798080 MDR-TB lineage2.2.1 in
ERR3287855 Pre-XDR-TB lineage4.3.3 pe
ERR3323715 MDR-TB lineage2.2.1 None
ERR4024920 HR-TB lineage4.1.1.3 None
ERR4797748 Pre-XDR-TB lineage4.8 in
ERR1035065 Pre-XDR-TB lineage2.2.1 za
ERR1035245 MDR-TB lineage2.2.1 pt
ERR1036277 MDR-TB lineage2.2.1 pt
ERR4797951 Pre-XDR-TB lineage2.2.1 in
SRR10380149 Pre-XDR-TB lineage2.2.1 None
ERR4799472 Pre-XDR-TB lineage2.2.1 in
ERR757163 Pre-XDR-TB lineage4.1.2.1.1 ar
ERR5864460 Pre-XDR-TB lineage2.2.1 None
ERR6866036 HR-TB lineage4.1.1.3 None
SRR10305620 Pre-XDR-TB lineage2.2.1 None
SRR1180184 MDR-TB lineage4.8 None
SRR1172252 MDR-TB lineage4.8 None
SRR1172151 MDR-TB lineage4.8 None
SRR15368722 Pre-XDR-TB lineage2.2.1 None
SRR13232675 Pre-XDR-TB lineage4.3.3 None
SRR1183085 MDR-TB lineage4.8 None
SRR13870364 XDR-TB lineage4 None
SRR15368719 MDR-TB lineage2.2.1 None
SRR16089670 Other lineage4.8 None