Rv3854c - c.672_673dupGC
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
15 MDR-TB
28 Pre-XDR-TB
1 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 15 |
| lineage2.2.1 | 20 |
| lineage4.3.3 | 7 |
| lineage4.1.1.3 | 2 |
| lineage4 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage2.2.2 | 2 |
| lineage2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 54 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28409614 | Other | lineage4.8 | None | ERR4797951 | Pre-XDR-TB | lineage2.2.1 | in | ERR8665910 | Pre-XDR-TB | lineage4.3.3 | None | SRR29093270 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866036 | MDR-TB | lineage4.1.1.3 | None | SRR13870364 | Pre-XDR-TB | lineage4 | None | SAMN02628523 | MDR-TB | lineage4.8 | ir | SRR16089670 | Other | lineage4.8 | None | ERR3287855 | Pre-XDR-TB | lineage4.3.3 | pe | ERR1035245 | MDR-TB | lineage2.2.1 | pt | ERR3323715 | MDR-TB | lineage2.2.1 | None | SRR1183085 | MDR-TB | lineage4.8 | None | SRR15368722 | Pre-XDR-TB | lineage2.2.1 | None | ERR13292137 | Other | lineage4.8 | None | ERR552036 | XDR-TB | lineage4.3.3 | None | ERR2020089 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6824463 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13291346 | Other | lineage4.8 | None | SRR25827377 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798080 | MDR-TB | lineage2.2.1 | in | SRR1723842 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4797748 | Pre-XDR-TB | lineage4.8 | in | SRR24256033 | Pre-XDR-TB | lineage4.3.3 | None | ERR1036277 | MDR-TB | lineage2.2.1 | pt | ERR4024920 | MDR-TB | lineage4.1.1.3 | None | SRR28409732 | Other | lineage4.8 | None | SRR28409731 | Other | lineage4.8 | None | SRR28393625 | MDR-TB | lineage4.1.2.1 | None | SRR6824461 | Pre-XDR-TB | lineage2.2.1 | cn | ERR9807026 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291347 | Other | lineage4.8 | None | ERR757163 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | SRR10305620 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232675 | Pre-XDR-TB | lineage4.3.3 | None | ERR2653070 | MDR-TB | lineage4.3.3 | None | SRR1172252 | MDR-TB | lineage4.8 | None | SRR1172151 | MDR-TB | lineage4.8 | None | SRR28467059 | Pre-XDR-TB | lineage2.2.2 | None | SRR15368719 | MDR-TB | lineage2.2.1 | None | ERR133887 | Pre-XDR-TB | lineage4.3.3 | ru | SRR11662677 | Pre-XDR-TB | lineage2.1 | None | SRR6280334 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR4821605 | Other | lineage4.8 | None | ERR4799472 | Pre-XDR-TB | lineage2.2.1 | in | SRR22873596 | Pre-XDR-TB | lineage2.2.2 | None | ERR13291093 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380149 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035065 | Pre-XDR-TB | lineage2.2.1 | za | SRR29081564 | Pre-XDR-TB | lineage4.3.2 | None | ERR275215 | MDR-TB | lineage2.2.1 | pt | SRR29055964 | Other | lineage4.8 | None | ERR2510409 | MDR-TB | lineage3 | pk | SRR19325551 | Other | lineage4.8 | None | SRR22424745 | Pre-XDR-TB | lineage2.2.1 | None |
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