Rv3854c - c.820_830delGAGGGGTACGA
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
4 MDR-TB
38 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 42 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1144813 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144783 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02398698 | Pre-XDR-TB | lineage2.2.2 | kr | SRR1013680 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048842 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360613 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02398711 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013679 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049074 | Pre-XDR-TB | lineage2.2.2 | None | ERR11138650 | Pre-XDR-TB | lineage2.2.2 | None | ERR11138653 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02398696 | Pre-XDR-TB | lineage2.2.2 | kr | SRR1048843 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013544 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013621 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR11138648 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02398712 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02398693 | Pre-XDR-TB | lineage2.2.2 | kr | SRR1049063 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048863 | MDR-TB | lineage2.2.2 | None | SRR1144807 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144776 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02398713 | Pre-XDR-TB | lineage2.2.2 | kr | SRR1049062 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144790 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360619 | Pre-XDR-TB | lineage2.2.2 | kr | SRR1013622 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360551 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02360561 | MDR-TB | lineage2.2.2 | kr | SAMN02398704 | Pre-XDR-TB | lineage2.2.2 | kr | SRR1144749 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013668 | Pre-XDR-TB | lineage2.2.2 | None | ERR11138658 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013543 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013669 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013564 | MDR-TB | lineage2.2.2 | None | SRR1049075 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144780 | Pre-XDR-TB | lineage2.2.2 | None | SRR1047984 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048864 | MDR-TB | lineage2.2.2 | None |
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