lineage | Count |
---|---|
lineage2.2.1 | 42 |
lineage4.1.1.3 | 8 |
lineage4.8 | 1 |
lineage2.2.1.1 | 1 |
lineage3 | 2 |
lineage1.2.2.1 | 2 |
lineage1.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 57 |
ID | Drug resistance | Lineage | Country iso2 | ERR1161616 | HR-TB | lineage2.2.1 | None | SRR12062506 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307663 | MDR-TB | lineage2.2.1 | None | SRR1196586 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10040311 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799875 | Pre-XDR-TB | lineage2.2.1 | in | SAMN02586071 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR1173038 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2307801 | HR-TB | lineage2.2.1 | None | SRR25827791 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045562 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290868 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307416 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799039 | Pre-XDR-TB | lineage2.2.1 | in | ERR13261560 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273769 | MDR-TB | lineage4.8 | None | SAMN02586064 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4817196 | HR-TB | lineage2.2.1 | gb | ERR1035023 | MDR-TB | lineage2.2.1 | za | ERR4796949 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799379 | Pre-XDR-TB | lineage2.2.1 | in | SRR7069346 | HR-TB | lineage2.2.1 | None | ERR4011078 | MDR-TB | lineage2.2.1 | None | SRR22175238 | MDR-TB | lineage3 | None | ERR2307643 | HR-TB | lineage2.2.1 | None | ERR3077941 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822067 | HR-TB | lineage2.2.1 | gb | ERR4797412 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798760 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798355 | MDR-TB | lineage2.2.1 | in | SRR28351319 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045927 | XDR-TB | lineage2.2.1 | None | ERR12916925 | XDR-TB | lineage2.2.1 | None | SRR28351359 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832402 | MDR-TB | lineage2.2.1 | None | ERR13266572 | XDR-TB | lineage2.2.1 | None | SRR12062505 | XDR-TB | lineage2.2.1 | None | ERR4799148 | Pre-XDR-TB | lineage2.2.1 | in | ERR10748174 | MDR-TB | lineage4.1.1.3 | None | ERR4896324 | MDR-TB | lineage2.2.1 | None | ERR4821691 | HR-TB | lineage2.2.1 | gb | ERR13266143 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307792 | MDR-TB | lineage2.2.1 | None | ERR4799187 | Pre-XDR-TB | lineage2.2.1 | in | ERR9806852 | MDR-TB | lineage1.2.2.1 | None | ERR2307666 | HR-TB | lineage2.2.1 | None | ERR2510576 | Pre-XDR-TB | lineage3 | pk | SRR1184360 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13266987 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR4799432 | Pre-XDR-TB | lineage2.2.1 | in | SRR1173422 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1175354 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10610189 | MDR-TB | lineage1.2.2.1 | None | ERR9806986 | MDR-TB | lineage2.2.1 | None | ERR4798183 | XDR-TB | lineage2.2.1 | in | ERR028609 | HR-TB | lineage2.2.1 | ee | SRR7653083 | Pre-XDR-TB | lineage2.2.1 | None |
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