Rv3854c - c.860delA
Drug resistance types
0 Sensitive
4 RR-TB
3 HR-TB
98 MDR-TB
38 Pre-XDR-TB
2 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 130 |
| lineage2.2.1 | 10 |
| lineage4.8 | 4 |
| lineage4.1.2.1;lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 145 |
Geographic prevalence
Country level data for this variant is available for 20 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11488679 | MDR-TB | lineage4.1.2.1 | None | ERR9806619 | MDR-TB | lineage4.1.2.1 | None | ERR11488854 | MDR-TB | lineage4.1.2.1 | None | ERR2515210 | MDR-TB | lineage4.1.2.1 | za | ERR11488769 | MDR-TB | lineage4.1.2.1 | None | ERR11488793 | MDR-TB | lineage4.1.2.1 | None | ERR4798256 | Pre-XDR-TB | lineage2.2.1 | in | ERR11488503 | MDR-TB | lineage4.1.2.1 | None | ERR7361998 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488447 | MDR-TB | lineage4.1.2.1 | None | SRR16058379 | RR-TB | lineage4.8 | None | ERR11488838 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10748360 | MDR-TB | lineage4.1.2.1 | None | ERR11488508 | MDR-TB | lineage4.1.2.1 | None | ERR2515246 | MDR-TB | lineage4.1.2.1 | za | ERR11488883 | MDR-TB | lineage4.1.2.1 | None | ERR11252556 | MDR-TB | lineage4.1.2.1 | None | SRR22461619 | HR-TB | lineage4.1.2.1 | None | ERR552010 | MDR-TB | lineage4.1.2.1 | sz | ERR2515284 | MDR-TB | lineage4.1.2.1 | za | ERR4423756 | MDR-TB | lineage4.1.2.1 | None | ERR8774466 | HR-TB | lineage4.1.2.1 | None | ERR11488731 | MDR-TB | lineage4.1.2.1 | None | ERR551045 | MDR-TB | lineage4.1.2.1 | sz | ERR2516943 | Pre-XDR-TB | lineage2.2.1 | gb | ERR9806688 | MDR-TB | lineage4.1.2.1 | None | ERR11488507 | MDR-TB | lineage4.1.2.1 | None | SRR1173548 | MDR-TB | lineage4.1.2.1 | None | ERR11488595 | MDR-TB | lineage4.1.2.1 | None | ERR8774468 | MDR-TB | lineage4.1.2.1 | None | SAMN02403638 | MDR-TB | lineage4.1.2.1 | za | ERR11488865 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488956 | MDR-TB | lineage4.1.2.1 | None | ERR11488466 | MDR-TB | lineage4.1.2.1 | None | ERR2515165 | MDR-TB | lineage4.1.2.1 | za | ERR11488927 | MDR-TB | lineage4.1.2.1 | None | ERR11488486 | MDR-TB | lineage4.1.2.1 | None | ERR11488905 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488645 | MDR-TB | lineage4.1.2.1 | None | ERR294263 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488468 | MDR-TB | lineage4.1.2.1 | None | ERR2515335 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR11488477 | MDR-TB | lineage4.1.2.1 | None | ERR11488413 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR17657993 | MDR-TB | lineage4.1.2.1 | None | ERR11488341 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4800068 | Pre-XDR-TB | lineage2.2.1 | in | ERR11488852 | MDR-TB | lineage4.1.2.1 | None | ERR4020200 | MDR-TB | lineage4.1.2.1 | None | ERR11488357 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10748490 | MDR-TB | lineage4.1.2.1 | None | ERR11488766 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488828 | MDR-TB | lineage4.1.2.1 | None | ERR11488846 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488596 | MDR-TB | lineage4.1.2.1 | None | ERR6362566 | MDR-TB | lineage4.1.2.1 | None | ERR11488648 | MDR-TB | lineage4.1.2.1 | None | ERR11488912 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488855 | MDR-TB | lineage4.1.2.1 | None | ERR7911191 | MDR-TB | lineage4.1.2.1 | za | ERR11488601 | MDR-TB | lineage4.1.2.1 | None | SRR1165318 | MDR-TB | lineage4.1.2.1 | None | ERR11488720 | MDR-TB | lineage4.1.2.1 | None | ERR11488331 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488930 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11489064 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR8975483 | MDR-TB | lineage4.1.2.1 | None | ERR11775078 | MDR-TB | lineage4.1.2.1 | None | ERR11252653 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488894 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4809284 | MDR-TB | lineage4.1.2.1 | za | ERR11488336 | MDR-TB | lineage4.1.2.1 | None | ERR10748478 | MDR-TB | lineage4.1.2.1 | None | ERR2515554 | MDR-TB | lineage4.1.2.1 | None | ERR7737812 | MDR-TB | lineage4.1.2.1 | None | ERR11489053 | MDR-TB | lineage4.1.2.1 | None | ERR11488644 | MDR-TB | lineage4.1.2.1 | None | SRR16058517 | RR-TB | lineage4.8 | None | ERR11488563 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488362 | MDR-TB | lineage4.1.2.1 | None | SRR1167295 | MDR-TB | lineage4.1.2.1 | None | ERR11488487 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488509 | MDR-TB | lineage4.1.2.1 | None | ERR4799622 | XDR-TB | lineage2.2.1 | in | ERR11488482 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488825 | MDR-TB | lineage4.1.2.1 | None | ERR11488465 | MDR-TB | lineage4.1.2.1 | None | ERR11466253 | MDR-TB | lineage4.1.2.1 | None | ERR4809003 | MDR-TB | lineage4.1.2.1 | None | ERR4423745 | MDR-TB | lineage4.1.2.1 | None | ERR551537 | MDR-TB | lineage4.1.2.1;lineage4.3.4.2 | sz | ERR11488504 | MDR-TB | lineage4.1.2.1 | None | ERR11488652 | MDR-TB | lineage4.1.2.1 | None | ERR11488662 | MDR-TB | lineage4.1.2.1 | None | ERR4799619 | XDR-TB | lineage2.2.1 | in | ERR11488602 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488604 | MDR-TB | lineage4.1.2.1 | None | ERR11488516 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488757 | MDR-TB | lineage4.1.2.1 | None | ERR11488598 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4799723 | Pre-XDR-TB | lineage2.2.1 | in | ERR4423743 | MDR-TB | lineage4.1.2.1 | None | ERR11489024 | MDR-TB | lineage4.1.2.1 | None | SRR1173582 | MDR-TB | lineage4.1.2.1 | None | ERR9992864 | MDR-TB | lineage4.1.2.1 | None | ERR11488673 | MDR-TB | lineage4.1.2.1 | None | ERR7361997 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9119834 | MDR-TB | lineage4.1.2.1 | None | SRR10869182 | MDR-TB | lineage4.1.2.1 | None | ERR11488441 | MDR-TB | lineage4.1.2.1 | None | ERR4809353 | MDR-TB | lineage4.1.2.1 | za | ERR11488893 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488893 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11489066 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11466502 | MDR-TB | lineage4.1.2.1 | None | ERR11488453 | MDR-TB | lineage4.1.2.1 | None | ERR11488581 | MDR-TB | lineage4.1.2.1 | None | ERR11488891 | MDR-TB | lineage4.1.2.1 | None | ERR11488354 | MDR-TB | lineage4.1.2.1 | None | ERR11488417 | MDR-TB | lineage4.1.2.1 | None | ERR4797351 | Pre-XDR-TB | lineage2.2.1 | in | ERR11489010 | MDR-TB | lineage4.1.2.1 | None | ERR9124951 | RR-TB | lineage4.8 | None | ERR9124929 | RR-TB | lineage4.8 | None | ERR11488960 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR2101598 | MDR-TB | lineage4.1.2.1 | None | ERR9993095 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | ERR11488327 | MDR-TB | lineage4.1.2.1 | None | ERR4799524 | Pre-XDR-TB | lineage2.2.1 | in | ERR11488675 | MDR-TB | lineage4.1.2.1 | None | ERR11488756 | MDR-TB | lineage4.1.2.1 | None | ERR11488386 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488361 | MDR-TB | lineage4.1.2.1 | None | ERR11466281 | MDR-TB | lineage4.1.2.1 | None | SRR2101053 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488804 | MDR-TB | lineage4.1.2.1 | None | ERR11488937 | MDR-TB | lineage4.1.2.1 | None | ERR4423755 | HR-TB | lineage4.1.2.1 | None | ERR4020199 | MDR-TB | lineage4.1.2.1 | None | ERR11488687 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR11349209 | MDR-TB | lineage4.1.2.1 | None | ERR11488510 | MDR-TB | lineage4.1.2.1 | None | SRR11349136 | MDR-TB | lineage4.1.2.1 | None | ERR11488788 | MDR-TB | lineage4.1.2.1 | None |
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