Rv3854c - c.864delC
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
20 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 17 |
| lineage2.2.1.1 | 1 |
| lineage4.8 | 1 |
| lineage4.1.4 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.1 | 8 |
| lineage4.2.2.2 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 33 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11489038 | MDR-TB | lineage4.3.4.2.1 | None | SRR25827367 | MDR-TB | lineage2.2.1.1 | None | ERR11488834 | MDR-TB | lineage4.3.4.2.1 | None | SRR7592331 | Pre-XDR-TB | lineage4.8 | None | ERR4972527 | Pre-XDR-TB | lineage4.1.4 | None | ERR3509860 | Pre-XDR-TB | lineage4.3.4.2.1 | None | SRR5341368 | MDR-TB | lineage1.1.2 | None | SRR15364442 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488671 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR11488995 | MDR-TB | lineage4.3.4.2.1 | None | ERR11488565 | MDR-TB | lineage4.3.4.2.1 | None | ERR11488555 | MDR-TB | lineage4.3.4.2.1 | None | SRR17856682 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488749 | MDR-TB | lineage4.3.4.2.1 | None | ERR11488911 | MDR-TB | lineage4.3.4.2.1 | None | ERR2516865 | MDR-TB | lineage2.2.1 | gb | ERR551090 | MDR-TB | lineage2.2.1 | ru | ERR11488488 | MDR-TB | lineage4.3.4.2.1 | None | ERR2433011 | MDR-TB | lineage4.3.4.2.1 | None | ERR4800015 | HR-TB | lineage4.2.2.2 | in | ERR11488728 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR4799589 | MDR-TB | lineage1.2.2.2 | in | SRR28706539 | MDR-TB | lineage2.2.1 | None | ERR11489037 | MDR-TB | lineage4.3.4.2.1 | None | ERR11488724 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR11488554 | MDR-TB | lineage4.3.4.2.1 | None | ERR4797491 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR11488408 | MDR-TB | lineage4.3.4.2.1 | None | SRR6384969 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516711 | MDR-TB | lineage2.2.1 | nl | ERR11488566 | MDR-TB | lineage4.3.4.2.1 | None | SRR28394014 | Pre-XDR-TB | lineage4.1.1 | None | SRR6384968 | Pre-XDR-TB | lineage2.2.1 | None |
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