Rv3854c - p.Ala89Glu
Drug resistance types
0 Sensitive
1 RR-TB
0 HR-TB
16 MDR-TB
98 Pre-XDR-TB
2 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 112 |
| lineage3 | 1 |
| lineage2.1;lineage2.2.1 | 1 |
| lineage5.2 | 2 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 117 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR22137430 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137413 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137431 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137435 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830902 | Pre-XDR-TB | lineage2.2.1 | np | SRR22137451 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265695 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276861 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137464 | Pre-XDR-TB | lineage2.2.1 | None | SRR16100235 | Pre-XDR-TB | lineage2.2.1 | None | SRR16097562 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798365 | Pre-XDR-TB | lineage2.2.1 | in | SRR22137455 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797611 | Pre-XDR-TB | lineage2.2.1 | in | SRR22137469 | Pre-XDR-TB | lineage2.2.1 | None | DRR130072 | Pre-XDR-TB | lineage2.2.1 | None | ERR13258398 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137457 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137421 | Pre-XDR-TB | lineage2.2.1 | None | ERR13258495 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137402 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137425 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539169 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137461 | Pre-XDR-TB | lineage2.2.1 | None | SRR28409723 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137416 | XDR-TB | lineage2.2.1 | None | SRR22137467 | Pre-XDR-TB | lineage2.2.1 | None | ERR1161619 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137426 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260093 | MDR-TB | lineage2.2.1 | None | SRR22137463 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045651 | MDR-TB | lineage2.2.1 | None | SRR28045463 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291573 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772444 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125486 | MDR-TB | lineage2.2.1 | None | ERR4830908 | Pre-XDR-TB | lineage2.2.1 | np | ERR4553609 | RR-TB | lineage3 | None | ERR13276413 | MDR-TB | lineage2.2.1 | None | SRR22137453 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058404 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137449 | MDR-TB | lineage2.2.1 | None | SRR22137427 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137423 | Pre-XDR-TB | lineage2.2.1 | None | SRR26112776 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830993 | Pre-XDR-TB | lineage2.2.1 | np | SRR22137410 | Pre-XDR-TB | lineage2.2.1 | None | SRR921502 | Pre-XDR-TB | lineage2.1;lineage2.2.1 | None | SRR22137472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830907 | Pre-XDR-TB | lineage2.2.1 | np | SRR22137418 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137454 | Pre-XDR-TB | lineage2.2.1 | None | SRR16057904 | MDR-TB | lineage2.2.1 | None | SRR18912994 | MDR-TB | lineage2.2.1 | None | ERR13265411 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137433 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137475 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291955 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137473 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137470 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137432 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798301 | Pre-XDR-TB | lineage2.2.1 | in | ERR13266764 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831774 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043812 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137428 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137462 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137412 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707002 | MDR-TB | lineage5.2 | cd | SRR22137471 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137429 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045255 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044553 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707170 | MDR-TB | lineage5.2 | cd | SRR22137466 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830910 | Pre-XDR-TB | lineage2.2.1 | np | SRR22137460 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887680 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137468 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830899 | Pre-XDR-TB | lineage2.2.1 | np | SRR22137474 | Pre-XDR-TB | lineage2.2.1 | None | SRR28046209 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125213 | MDR-TB | lineage2.2.1 | None | SRR29441041 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058662 | MDR-TB | lineage2.2.1 | None | SRR070008 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266761 | XDR-TB | lineage2.2.1 | None | DRR130192 | Pre-XDR-TB | lineage2.2.2 | None | SRR16058676 | MDR-TB | lineage2.2.1 | None | ERR11081227 | MDR-TB | lineage2.2.1 | None | ERR13259992 | MDR-TB | lineage2.2.1 | None | ERR4830962 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830659 | Pre-XDR-TB | lineage2.2.1 | np | SRR069948 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830906 | Pre-XDR-TB | lineage2.2.1 | np | SRR22137391 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424931 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137459 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137446 | Pre-XDR-TB | lineage2.2.1 | None | SRR069927 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827335 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137419 | Pre-XDR-TB | lineage2.2.1 | None | SRR16115879 | MDR-TB | lineage2.2.1 | None | SRR25827600 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307689 | Pre-XDR-TB | lineage2.2.1 | None | DRR130071 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830900 | Pre-XDR-TB | lineage2.2.1 | np | SRR28045574 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044798 | Pre-XDR-TB | lineage2.2.1 | None | SRR30182501 | MDR-TB | lineage2.2.1 | None | SRR22137478 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137456 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125253 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137424 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137450 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137479 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137414 | Pre-XDR-TB | lineage2.2.1 | None |
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