Rv3854c - p.Asp56Ala
Drug resistance types
2 Sensitive
0 RR-TB
4 HR-TB
51 MDR-TB
20 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 3 |
| lineage4.9.1 | 3 |
| lineage3 | 4 |
| lineage2.2.1.1 | 10 |
| lineage2.2.2 | 5 |
| lineage2.2.1 | 28 |
| lineage4.5 | 3 |
| lineage4.4.1.1.1 | 10 |
| lineage3.1.2.1 | 3 |
| 1 | |
| lineage4.3.4.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1;lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 78 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7829587 | Pre-XDR-TB | lineage4.1.2 | None | ERR11488328 | MDR-TB | lineage4.9.1 | None | SRR29017522 | MDR-TB | lineage3 | None | ERR2516959 | Pre-XDR-TB | lineage2.2.1.1 | gb | SRR29225203 | HR-TB | lineage2.2.2 | None | SRR28351203 | MDR-TB | lineage2.2.1 | None | SRR1723914 | Sensitive | lineage4.5 | cn | SRR1165650 | MDR-TB | lineage4.4.1.1.1 | None | SRR22175178 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799109 | MDR-TB | lineage3.1.2.1 | in | SRR23861752 | MDR-TB | lineage2.2.1 | None | ERR4553449 | MDR-TB | None | ERR11488739 | MDR-TB | lineage4.9.1 | None | SRR6257016 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865197 | MDR-TB | lineage2.2.1 | None | SRR25827526 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140926 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR10040436 | MDR-TB | lineage2.2.1.1 | None | SRR6785154 | MDR-TB | lineage2.2.1 | None | ERR8975012 | MDR-TB | lineage4.7 | None | SRR10380113 | MDR-TB | lineage2.2.1 | None | ERR2179645 | Sensitive | lineage4.5 | cn | ERR2510683 | Pre-XDR-TB | lineage4.1.2 | it | SRR28351490 | Pre-XDR-TB | lineage2.2.1 | None | ERR9907714 | MDR-TB | lineage4.3.3 | None | SRR1169275 | MDR-TB | lineage4.4.1.1.1 | None | SRR29231544 | MDR-TB | lineage4.3.4.1 | None | SRR28351594 | MDR-TB | lineage2.2.1.1 | None | SRR28046102 | Pre-XDR-TB | lineage3 | None | ERR11773780 | MDR-TB | lineage2.2.1 | None | SRR30182680 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR5865193 | MDR-TB | lineage2.2.1 | None | ERR11068784 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488593 | MDR-TB | lineage4.9.1 | None | ERR5865196 | MDR-TB | lineage2.2.1 | None | ERR12796613 | MDR-TB | lineage2.2.1 | None | ERR3287503 | MDR-TB | lineage4.1.2.1 | None | ERR2510574 | Pre-XDR-TB | lineage4.5 | pk | SRR29093119 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02350484 | MDR-TB | lineage4.4.1.1.1 | za | ERR2516846 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR11081136 | MDR-TB | lineage3 | None | ERR4796307 | MDR-TB | lineage3.1.2.1 | None | SRR5266537 | Pre-XDR-TB | lineage2.2.1 | ru | ERR5865194 | MDR-TB | lineage2.2.1 | None | SAMN02350490 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SRR28239581 | MDR-TB | lineage2.2.1 | None | ERR158609 | Pre-XDR-TB | lineage2.2.1.1 | gb | SRR25827474 | MDR-TB | lineage3.1.2.1 | None | SRR23310950 | MDR-TB | lineage2.2.1 | None | SRR11033663 | MDR-TB | lineage2.2.1 | None | SRR16370548 | MDR-TB | lineage2.2.1.1 | None | ERR5865195 | MDR-TB | lineage2.2.1 | None | SRR28498674 | MDR-TB | lineage2.2.1 | None | SRR18003048 | XDR-TB | lineage2.2.1 | None | SAMN02403565 | MDR-TB | lineage4.4.1.1.1 | za | ERR11068582 | HR-TB | lineage2.2.1 | None | SRR29225202 | HR-TB | lineage2.2.2 | None | SRR29225201 | HR-TB | lineage2.2.2 | None | SRR1019159 | MDR-TB | lineage4.4.1.1.1 | None | SRR5152951 | MDR-TB | lineage2.2.1 | None | ERR13284648 | MDR-TB | lineage3 | None | SRR6824707 | MDR-TB | lineage2.2.1;lineage4.5 | cn | SRR1140945 | MDR-TB | lineage4.4.1.1.1 | None | ERR4828807 | Pre-XDR-TB | lineage4.1.2 | None | SRR1167390 | MDR-TB | lineage4.4.1.1.1 | None | SRR26558637 | MDR-TB | lineage2.2.1.1 | None | ERR4827756 | MDR-TB | lineage2.2.1 | None | ERR11043921 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068883 | MDR-TB | lineage2.2.1.1 | None | ERR2707216 | MDR-TB | lineage4.3.4.1 | cd | SRR29093925 | MDR-TB | lineage2.2.2 | None | SRR16088335 | MDR-TB | lineage2.2.1 | None | SRR1166316 | MDR-TB | lineage4.1.2.1 | ro | SRR1169211 | MDR-TB | lineage4.4.1.1.1 | None | ERR4798762 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799089 | Pre-XDR-TB | lineage2.2.1 | in | ERR7911116 | MDR-TB | lineage2.2.1.1 | vn |
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