Rv3854c - p.Asp56Ala
Drug resistance types
2 Sensitive
0 RR-TB
1 HR-TB
40 MDR-TB
18 Pre-XDR-TB
1 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1.1 | 8 |
| lineage2.2.1 | 22 |
| lineage4.3.3 | 1 |
| lineage4.4.1.1 | 3 |
| lineage2.2.1.1 | 7 |
| lineage4.3.4.2.1 | 1 |
| lineage3 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.5 | 3 |
| lineage4.8 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.1.2 | 3 |
| lineage4.9.1 | 3 |
| lineage4.1.1 | 1 |
| 1 | |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 63 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1140926 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1019159 | MDR-TB | lineage4.4.1.1.1 | None | SRR10380113 | MDR-TB | lineage2.2.1 | None | SRR11033663 | MDR-TB | lineage2.2.1 | None | ERR9907714 | MDR-TB | lineage4.3.3 | None | SRR1019173 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1165650 | MDR-TB | lineage4.4.1.1 | None | SRR1140945 | MDR-TB | lineage4.4.1.1.1 | None | SRR1167390 | MDR-TB | lineage4.4.1.1 | None | SRR1169211 | MDR-TB | lineage4.4.1.1.1 | None | SRR18003048 | XDR-TB | lineage2.2.1 | None | SRR1169275 | MDR-TB | lineage4.4.1.1.1 | None | SRR16370548 | MDR-TB | lineage2.2.1.1 | None | SRR22175178 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827526 | MDR-TB | lineage4.3.4.2.1 | None | SRR23861752 | MDR-TB | lineage2.2.1 | None | ERR11068582 | HR-TB | lineage2.2.1 | None | ERR11068784 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068883 | MDR-TB | lineage2.2.1.1 | None | ERR11081136 | MDR-TB | lineage3 | None | SAMN02350490 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SRR28239581 | MDR-TB | lineage2.2.1 | None | SRR6824707 | MDR-TB | lineage4.5;lineage2.2.1 | cn | SRR26558637 | MDR-TB | lineage2.2.1.1 | None | SRR25827474 | MDR-TB | lineage3.1.2.1 | None | SRR1723914 | Sensitive | lineage4.5 | cn | SAMN02350484 | MDR-TB | lineage4.4.1.1.1 | za | ERR1950029 | Other | lineage4.8 | None | ERR7911116 | MDR-TB | lineage2.2.1.1 | vn | ERR158609 | Pre-XDR-TB | lineage2.2.1.1 | gb | SRR5152951 | MDR-TB | lineage2.2.1 | None | SRR23310950 | MDR-TB | lineage2.2 | None | SAMN02403565 | MDR-TB | lineage4.4.1.1.1 | za | ERR2707216 | MDR-TB | lineage4.3.4.1 | cd | SRR1166316 | MDR-TB | lineage4.1.2.1 | ro | SRR5266537 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4798762 | Pre-XDR-TB | lineage2.2.1 | in | ERR4827756 | MDR-TB | lineage2.2.1 | None | ERR2179645 | Sensitive | lineage4.5 | cn | ERR4799089 | Pre-XDR-TB | lineage2.2.1 | in | ERR2516959 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR2516846 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR4828807 | Pre-XDR-TB | lineage4.1.2 | None | ERR4799109 | MDR-TB | lineage3.1.2.1 | in | SRR6257016 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785154 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510574 | Pre-XDR-TB | lineage4.5 | pk | ERR11488593 | MDR-TB | lineage4.9.1 | None | SRR7829587 | Pre-XDR-TB | lineage4.1.2 | None | ERR2510683 | Pre-XDR-TB | lineage4.1.2 | it | ERR11043921 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748302 | MDR-TB | lineage4.1.1 | None | ERR11488328 | MDR-TB | lineage4.9.1 | None | ERR4553449 | MDR-TB | None | ERR11488739 | MDR-TB | lineage4.9.1 | None | ERR3287503 | MDR-TB | lineage4.1.2.1 | None | ERR5865193 | MDR-TB | lineage2.2.1 | None | ERR8975012 | MDR-TB | lineage4.7 | None | ERR5865195 | MDR-TB | lineage2.2.1 | None | ERR5865194 | MDR-TB | lineage2.2.1 | None | ERR5865197 | MDR-TB | lineage2.2.1 | None | ERR5865196 | MDR-TB | lineage2.2.1 | None | SRR16088335 | MDR-TB | lineage2.2.1 | None |
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