Rv3854c - p.Leu440Pro
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
3 RR-TB
2 HR-TB
87 MDR-TB
36 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 127 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 129 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR23862095 | MDR-TB | lineage2.2.1 | None | SRR16087882 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802282 | MDR-TB | lineage2.2.1 | None | ERR067692 | MDR-TB | lineage2.2.1 | ru | ERR144623 | Pre-XDR-TB | lineage2.2.1;lineage4 | ru | ERR2512467 | MDR-TB | lineage2.2.1 | gb | ERR2307618 | MDR-TB | lineage2.2.1 | None | SRR16370527 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152919 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284756 | MDR-TB | lineage2.2.1 | None | SRR23310891 | MDR-TB | lineage2.2.1 | None | ERR11068896 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085282 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864635 | MDR-TB | lineage2.2.1 | None | ERR5866337 | MDR-TB | lineage2.2.1 | None | ERR5865790 | MDR-TB | lineage2.2.1 | None | ERR10869438 | MDR-TB | lineage2.2.1 | None | ERR5866297 | MDR-TB | lineage2.2.1 | None | ERR2510850 | Pre-XDR-TB | lineage2.2.1 | it | ERR144571 | MDR-TB | lineage2.2.1 | ru | ERR234630 | MDR-TB | lineage2.2.1 | ru | ERR2510853 | Pre-XDR-TB | lineage2.2.1 | it | ERR5866517 | MDR-TB | lineage2.2.1 | None | ERR5864374 | MDR-TB | lineage2.2.1 | None | ERR5866298 | MDR-TB | lineage2.2.1 | None | ERR5866336 | MDR-TB | lineage2.2.1 | None | ERR5864628 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165524 | MDR-TB | lineage2.2.1 | None | ERR5866375 | MDR-TB | lineage2.2.1 | None | SRR29681371 | MDR-TB | lineage2.2.1 | None | ERR5864630 | Pre-XDR-TB | lineage2.2.1 | None | ERR13273290 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865358 | MDR-TB | lineage2.2.1 | None | SRR7516383 | MDR-TB | lineage2.2.1 | None | ERR5864373 | MDR-TB | lineage2.2.1 | None | ERR5864636 | MDR-TB | lineage2.2.1 | None | ERR5866518 | MDR-TB | lineage2.2.1 | None | ERR11243533 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351377 | MDR-TB | lineage2.2.1 | None | ERR5864379 | MDR-TB | lineage2.2.1 | None | ERR13290301 | MDR-TB | lineage2.2.1 | None | ERR3148180 | MDR-TB | lineage2.2.1 | mx | ERR13284781 | MDR-TB | lineage2.2.1 | None | ERR137276 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR4822392 | Pre-XDR-TB | lineage2.2.1 | kg | ERR553108 | HR-TB | lineage2.2.1 | None | SRR1165549 | MDR-TB | lineage2.2.1 | None | ERR550834 | MDR-TB | lineage2.2.1 | None | ERR550833 | MDR-TB | lineage2.2.1 | None | SRR10397211 | MDR-TB | lineage2.2.1 | None | ERR2510848 | Pre-XDR-TB | lineage2.2.1 | it | ERR552348 | MDR-TB | lineage2.2.1 | None | ERR13284887 | MDR-TB | lineage2.2.1 | None | ERR11798545 | MDR-TB | lineage2.2.1 | None | ERR403289 | MDR-TB | lineage2.2.1 | None | ERR3276267 | MDR-TB | lineage2.2.1 | nl | ERR13290299 | MDR-TB | lineage2.2.1 | None | ERR5864629 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243532 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864375 | MDR-TB | lineage2.2.1 | None | SRR16088565 | MDR-TB | lineage2.2.1 | None | ERR551421 | MDR-TB | lineage2.2.1 | None | ERR5864378 | MDR-TB | lineage2.2.1 | None | SRR28434996 | Pre-XDR-TB | lineage2.2.1 | None | SRR23340154 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498394 | MDR-TB | lineage2.2.1 | None | SRR7516443 | MDR-TB | lineage2.2.1 | None | SRR1166879 | MDR-TB | lineage2.2.1 | None | ERR5865833 | MDR-TB | lineage2.2.1 | None | SRR7516296 | Pre-XDR-TB | lineage2.2.1 | None | SRR11033651 | MDR-TB | lineage2.2.1 | None | SRR23861951 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830058 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539714 | MDR-TB | lineage2.2.1 | None | ERR4828110 | MDR-TB | lineage2.2.1 | None | SRR28351631 | MDR-TB | lineage2.2.1 | None | ERR11775780 | MDR-TB | lineage2.2.1 | None | ERR5865789 | MDR-TB | lineage2.2.1 | None | ERR1023296 | HR-TB | lineage2.2.1 | None | ERR5865359 | MDR-TB | lineage2.2.1 | None | SRR10380099 | MDR-TB | lineage2.2.1 | None | ERR2516209 | MDR-TB | lineage2.2.1 | be | ERR2514422 | MDR-TB | lineage2.2.1 | gb | ERR5864380 | MDR-TB | lineage2.2.1 | None | ERR5865285 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866433 | RR-TB | lineage2.2.1 | None | SRR16087953 | MDR-TB | lineage2.2.1 | None | SRR14782379 | MDR-TB | lineage2.2.1 | None | SRR16168839 | XDR-TB | lineage2.2.1 | None | SRR6785289 | MDR-TB | lineage2.2.1 | None | ERR5866377 | RR-TB | lineage2.2.1 | None | ERR11775745 | MDR-TB | lineage2.2.1 | None | SRR3085314 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864632 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864626 | MDR-TB | lineage2.2.1 | None | ERR5866460 | MDR-TB | lineage2.2.1 | None | ERR5865834 | MDR-TB | lineage2.2.1 | None | ERR5864376 | MDR-TB | lineage2.2.1 | None | ERR552387 | MDR-TB | lineage2.2.1 | None | ERR5864631 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865945 | Pre-XDR-TB | lineage2.2.1 | None | ERR7975689 | MDR-TB | lineage2.2.1 | None | ERR11798544 | MDR-TB | lineage2.2.1 | None | ERR13284934 | MDR-TB | lineage2.2.1 | None | ERR2307421 | MDR-TB | lineage2.2.1 | None | ERR5866335 | MDR-TB | lineage2.2.1 | None | ERR551615 | MDR-TB | lineage2.2.1 | None | ERR5865286 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290298 | MDR-TB | lineage2.2.1 | None | ERR13290300 | MDR-TB | lineage2.2.1 | None | ERR11243534 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397101 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256222 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865287 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864633 | MDR-TB | lineage2.2.1 | None | ERR5866432 | RR-TB | lineage2.2.1 | None | SRR10397136 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866376 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257072 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864634 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827550 | MDR-TB | lineage2.2.1 | None | SRR1162695 | MDR-TB | lineage2.2.1 | None | ERR13284796 | MDR-TB | lineage2.2.1 | None | ERR5864377 | MDR-TB | lineage2.2.1 | None | ERR5866296 | MDR-TB | lineage2.2.1 | None | ERR403244 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864627 | MDR-TB | lineage2.2.1 | None | ERR5866461 | MDR-TB | lineage2.2.1 | None | SAMN02414858 | MDR-TB | lineage2.2.1 | se |
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