lineage | Count |
---|---|
lineage4.1.1.3 | 19 |
lineage2.2.1 | 20 |
lineage2.2.1.1 | 9 |
lineage4.1.1.1 | 1 |
lineage1.1.2 | 2 |
lineage3.1 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 53 |
ID | Drug resistance | Lineage | Country iso2 | ERR11488748 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR6856071 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2516025 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR552518 | MDR-TB | lineage4.1.1.3 | sz | ERR11488963 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR13232579 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465094 | MDR-TB | lineage4.1.1.3 | None | ERR8665927 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798432 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR11466369 | MDR-TB | lineage4.1.1.3 | None | ERR2515345 | MDR-TB | lineage4.1.1.3 | za | ERR8975011 | MDR-TB | lineage4.1.1.1 | None | ERR8665926 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665545 | Pre-XDR-TB | lineage2.2.1 | None | SRR29356824 | HR-TB | lineage1.1.2 | None | SRR29772542 | HR-TB | lineage3.1 | None | SRR29772614 | MDR-TB | lineage2.2.1.1 | None | ERR13266637 | XDR-TB | lineage2.2.1.1 | None | SRR22175243 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR8665943 | Pre-XDR-TB | lineage2.2.1 | None | SRR13120448 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488787 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8665976 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175208 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515474 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR8665826 | Pre-XDR-TB | lineage2.2.1 | None | ERR550619 | Pre-XDR-TB | lineage4.1.1.3 | sz | ERR8665942 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266871 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4800520 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR8665977 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665950 | Pre-XDR-TB | lineage2.2.1 | None | ERR551692 | Pre-XDR-TB | lineage4.1.1.3 | sz | ERR11488922 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8665887 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488857 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8665951 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774390 | MDR-TB | lineage4.1.1.3 | None | SRR9738488 | Pre-XDR-TB | lineage4.8 | None | ERR8665975 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797506 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR28351281 | XDR-TB | lineage2.2.1.1 | None | SRR24222949 | HR-TB | lineage1.1.2 | None | SRR6896156 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11488548 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8665546 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665846 | Pre-XDR-TB | lineage2.2.1 | None | ERR4423709 | MDR-TB | lineage4.1.1.3 | None | ERR8665935 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665934 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798949 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13289388 | XDR-TB | lineage4.1.1.3 | None | ERR8665974 | Pre-XDR-TB | lineage2.2.1 | None |
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