Rv3854c - p.Ser390Phe
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
31 MDR-TB
39 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8.1 | 10 |
| lineage2.2.1 | 43 |
| lineage4.7 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage4.3.3 | 4 |
| lineage4.2.2.2 | 2 |
| lineage2.2.1;lineage4.3.2 | 1 |
| lineage2.2.2 | 2 |
| lineage2.2.1;lineage4.7 | 4 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 71 |
Geographic prevalence
Country level data for this variant is available for 30 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10315662 | MDR-TB | lineage4.8.1 | None | SRR1169250 | MDR-TB | lineage4.8.1 | None | ERR4813204 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4813214 | MDR-TB | lineage2.2.1 | pe | ERR4827971 | MDR-TB | lineage4.7 | None | ERR775382 | Pre-XDR-TB | lineage2.2.1 | pe | SRR1169315 | MDR-TB | lineage4.8.1 | None | ERR6865428 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287433 | MDR-TB | lineage2.2.1 | pe | ERR4813180 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | pe | ERR2184241 | MDR-TB | lineage2.2.1 | pe | ERR4812905 | MDR-TB | lineage2.2.1 | pe | SRR6824547 | MDR-TB | lineage2.2.1 | cn | SAMN02419617 | Pre-XDR-TB | lineage4.3.3 | by | SRR1168981 | Pre-XDR-TB | lineage4.3.3 | None | ERR4799949 | HR-TB | lineage4.2.2.2 | in | ERR4812913 | MDR-TB | lineage2.2.1 | None | SRR10808404 | MDR-TB | lineage2.2.1 | None | ERR4813078 | Pre-XDR-TB | lineage2.2.1 | pe | SRR8237351 | MDR-TB | lineage2.2.1 | np | ERR4813175 | Pre-XDR-TB | lineage2.2.1 | pe | SRR671796 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3287837 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4813188 | Pre-XDR-TB | lineage2.2.1;lineage4.3.2 | pe | SRR1050530 | Pre-XDR-TB | lineage2.2.2 | None | ERR2124101 | MDR-TB | lineage2.2.1 | None | SRR13870426 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA104362086 | Pre-XDR-TB | lineage2.2.1;lineage4.7 | None | ERR12117980 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813155 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4812705 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4813153 | MDR-TB | lineage2.2.1 | None | SRR11349139 | MDR-TB | lineage4.8.1 | None | ERR4813042 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4813351 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813398 | MDR-TB | lineage2.2.1 | pe | SRR1165654 | MDR-TB | lineage4.8.1 | None | SRR10315661 | MDR-TB | lineage4.8.1 | None | ERR3287843 | Pre-XDR-TB | lineage2.2.1 | pe | SRR1144733 | Pre-XDR-TB | lineage2.2.2 | None | SRR1172308 | Pre-XDR-TB | lineage4.3.3 | None | ERR3509864 | MDR-TB | lineage4.3.4.2.1 | None | ERR12117973 | Pre-XDR-TB | lineage2.2.1 | None | SRR25515252 | MDR-TB | lineage2.2.1 | None | ERR2184245 | Pre-XDR-TB | lineage2.2.1;lineage4.7 | None | SRR28394150 | MDR-TB | lineage2.2.1 | None | SRR28393884 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR12117996 | Pre-XDR-TB | lineage2.2.1 | None | SRR13870368 | MDR-TB | lineage2.2.1 | None | ERR2516697 | MDR-TB | lineage2.2.1 | pe | ERR4830526 | MDR-TB | lineage4.8.1 | za | SRR17406765 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR13870406 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516624 | MDR-TB | lineage2.2.1 | pe | ERR3287741 | MDR-TB | lineage2.2.1 | pe | SRR9971084 | MDR-TB | lineage4.8.1 | None | ERR3287584 | Pre-XDR-TB | lineage2.2.1 | None | ERR4024907 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812839 | MDR-TB | lineage2.2.1 | None | ERR4813207 | Pre-XDR-TB | lineage2.2.1 | pe | SRR22249446 | Pre-XDR-TB | lineage2.2.1 | None | SRR10808400 | Pre-XDR-TB | lineage2.2.1;lineage4.7 | None | ERR4799802 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR1167347 | MDR-TB | lineage4.8.1 | None | ERR4813574 | Pre-XDR-TB | lineage2.2.1 | None | SRR13870366 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723461 | MDR-TB | lineage2.2.1 | cn | SRR1166910 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02403582 | MDR-TB | lineage4.8.1 | za | ERR9029917 | Pre-XDR-TB | lineage2.2.1;lineage4.7 | None | ERR4813170 | Pre-XDR-TB | lineage2.2.1 | pe |
|---|
