Rv3854c - p.Trp391*
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
12 HR-TB
54 MDR-TB
41 Pre-XDR-TB
2 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 83 |
| lineage3.1.1 | 3 |
| lineage4.3.3 | 1 |
| lineage4.6.2.2 | 11 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.8 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 109 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMEA2534642 | Pre-XDR-TB | lineage2.2.1 | ru | SRR14782615 | MDR-TB | lineage2.2.1 | None | ERR553348 | MDR-TB | lineage2.2.1 | None | SRR6832609 | MDR-TB | lineage2.2.1 | None | SRR13180320 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516364 | XDR-TB | lineage2.2.1 | be | SRR14781844 | MDR-TB | lineage2.2.1 | None | SRR3743474 | MDR-TB | lineage2.2.1 | None | ERR11775734 | MDR-TB | lineage2.2.1 | None | ERR4596909 | MDR-TB | lineage3.1.1 | None | ERR10762252 | MDR-TB | lineage2.2.1 | None | SRR5153883 | MDR-TB | lineage2.2.1 | None | ERR10219878 | Pre-XDR-TB | lineage2.2.1 | None | SRR13870425 | Pre-XDR-TB | lineage4.3.3 | None | ERR13285929 | MDR-TB | lineage2.2.1 | None | SRR13180211 | MDR-TB | lineage2.2.1 | None | SRR29231785 | MDR-TB | lineage4.6.2.2 | None | ERR13285738 | MDR-TB | lineage2.2.1 | None | ERR13285902 | MDR-TB | lineage2.2.1 | None | ERR10762264 | MDR-TB | lineage2.2.1 | None | ERR551011 | MDR-TB | lineage2.2.1 | None | ERR10762250 | MDR-TB | lineage2.2.1 | None | SRR23311052 | MDR-TB | lineage2.2.1 | None | SRR6484967 | MDR-TB | lineage2.2.1 | None | SRR6831815 | HR-TB | lineage2.2.1 | None | ERR13285818 | MDR-TB | lineage2.2.1 | None | ERR067749 | MDR-TB | lineage2.2.1 | ru | SRR6831817 | HR-TB | lineage2.2.1 | None | ERR3335757 | Pre-XDR-TB | lineage4.5 | pk | ERR4822400 | Pre-XDR-TB | lineage2.2.1 | ua | ERR4822302 | Pre-XDR-TB | lineage2.2.1 | de | ERR7910925 | MDR-TB | lineage2.2.1 | md | ERR2510840 | Pre-XDR-TB | lineage2.2.1 | it | SRR6832369 | MDR-TB | lineage2.2.1 | None | ERR1413485 | HR-TB | lineage4.6.2.2 | gb | ERR7911067 | MDR-TB | lineage2.2.1 | md | SRR5153307 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794521 | MDR-TB | lineage2.2.1 | None | ERR067638 | HR-TB | lineage2.2.1 | ru | ERR4423626 | Pre-XDR-TB | lineage4.6.2.2 | None | SRR6832658 | MDR-TB | lineage2.2.1 | None | ERR2433013 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR5865928 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794379 | MDR-TB | lineage2.2.1 | None | ERR8665621 | Pre-XDR-TB | lineage2.2.1 | None | ERR552429 | Pre-XDR-TB | lineage2.2.1 | None | SRR12882345 | HR-TB | lineage3.1.1 | None | SRR28393746 | MDR-TB | lineage4.1.1.3 | None | ERR3794355 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832354 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284356 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284755 | MDR-TB | lineage2.2.1 | None | SRR6831956 | HR-TB | lineage2.2.1;lineage4.3.3 | None | ERR11083014 | Pre-XDR-TB | lineage2.2.1 | None | ERR13278951 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284764 | MDR-TB | lineage2.2.1 | None | ERR3077987 | HR-TB | lineage3.1.1 | None | ERR13284614 | MDR-TB | lineage2.2.1 | None | ERR13285737 | MDR-TB | lineage2.2.1 | None | ERR275201 | HR-TB | lineage4.3.4.2.1 | pt | SRR10380155 | MDR-TB | lineage2.2.1 | None | ERR4799566 | Pre-XDR-TB | lineage2.2.1 | in | SRR29231807 | MDR-TB | lineage4.6.2.2 | None | ERR4797643 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797812 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR29231722 | MDR-TB | lineage4.6.2.2 | None | ERR4796724 | Pre-XDR-TB | lineage2.2.1 | in | ERR4827895 | MDR-TB | lineage2.2.1 | None | ERR4822381 | Pre-XDR-TB | lineage2.2.1 | kg | SRR28498405 | MDR-TB | lineage2.2.1 | None | ERR4813018 | MDR-TB | lineage4.8 | None | ERR2433006 | HR-TB | lineage4.3.4.2.1 | br | SRR5266536 | MDR-TB | lineage2.2.1 | ru | ERR234562 | MDR-TB | lineage2.2.1 | ru | ERR2677390 | Pre-XDR-TB | lineage2.2.1 | de | ERR144545 | HR-TB | lineage2.2.1 | ru | ERR108423 | HR-TB | lineage2.2.1 | ru | ERR1035213 | HR-TB | lineage4.3.4.2.1 | pt | ERR8665622 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796390 | Pre-XDR-TB | lineage2.2.1 | in | ERR10762348 | MDR-TB | lineage2.2.1 | None | SRR10379989 | MDR-TB | lineage2.2.1 | None | SRR14782012 | MDR-TB | lineage2.2.1 | None | SRR10380176 | MDR-TB | lineage2.2.1 | None | ERR8774243 | Pre-XDR-TB | lineage4.6.2.2 | None | SRR8847012 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539432 | Pre-XDR-TB | lineage2.2.1 | None | SRR10379914 | MDR-TB | lineage2.2.1 | None | ERR13284419 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307384 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762409 | MDR-TB | lineage2.2.1 | None | ERR10762397 | MDR-TB | lineage2.2.1 | None | ERR5866095 | XDR-TB | lineage2.2.1 | None | SRR29274733 | MDR-TB | lineage2.2.1 | None | ERR2433009 | Pre-XDR-TB | lineage4.3.4.2.1 | None | SRR22424726 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231773 | MDR-TB | lineage4.6.2.2 | None | SRR24710274 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797366 | Pre-XDR-TB | lineage2.2.1 | in | ERR552430 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822325 | Pre-XDR-TB | lineage2.2.1 | de | ERR4798354 | Pre-XDR-TB | lineage2.2.1 | in | ERR11083063 | MDR-TB | lineage2.2.1 | None | SRR8651656 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2707096 | MDR-TB | lineage4.6.2.2 | cd | ERR2707017 | MDR-TB | lineage4.6.2.2 | cd | ERR2707023 | MDR-TB | lineage4.6.2.2 | cd | ERR2707201 | MDR-TB | lineage4.6.2.2 | cd | ERR2516549 | Pre-XDR-TB | lineage3 | nl |
|---|
