Rv3854c - p.Tyr140*
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
3 HR-TB
99 MDR-TB
51 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 147 |
| lineage2.2.1;lineage4.7 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2 | 2 |
| lineage4.2.2.1 | 2 |
| lineage4.1.2.1.1 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 155 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18715285 | Pre-XDR-TB | lineage2.2.1 | None | SRR28239611 | MDR-TB | lineage2.2.1 | None | ERR5866089 | MDR-TB | lineage2.2.1 | None | SRR16087907 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832769 | MDR-TB | lineage2.2.1 | None | SRR18715400 | MDR-TB | lineage2.2.1 | None | SRR24256176 | MDR-TB | lineage2.2.1 | None | SRR6832250 | MDR-TB | lineage2.2.1 | None | SRR6832598 | MDR-TB | lineage2.2.1 | None | SRR7781513 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715203 | MDR-TB | lineage2.2.1 | None | ERR13284488 | MDR-TB | lineage2.2.1 | None | ERR11068740 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510279 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510329 | Pre-XDR-TB | lineage2.2.1 | it | ERR5865726 | MDR-TB | lineage2.2.1 | None | ERR4830966 | Pre-XDR-TB | lineage2.2.1 | np | ERR4829068 | MDR-TB | lineage2.2.1 | ng | ERR4829386 | Pre-XDR-TB | lineage2.2.1 | it | ERR5865900 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256375 | MDR-TB | lineage2.2.1 | None | SRR24799275 | MDR-TB | lineage2.2.1 | None | SRR16088341 | MDR-TB | lineage2.2.1 | None | ERR13284581 | MDR-TB | lineage2.2.1 | None | SRR6832166 | MDR-TB | lineage2.2.1 | None | SRR29539205 | MDR-TB | lineage2.2.1 | None | SRR29539025 | MDR-TB | lineage2.2.1 | None | ERR11043921 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539056 | MDR-TB | lineage2.2.1 | None | ERR11068412 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539656 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243536 | MDR-TB | lineage2.2.1 | None | SRR29539161 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257051 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681219 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829040 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539014 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539129 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082273 | MDR-TB | lineage2.2.1;lineage4.7 | None | SRR29681490 | MDR-TB | lineage2.2.1 | None | SRR29016816 | MDR-TB | lineage1.1.3.1 | None | SRR15901694 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865902 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681458 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539540 | MDR-TB | lineage2.2.1 | None | SRR16088583 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256263 | MDR-TB | lineage2.2.1 | None | ERR2307469 | MDR-TB | lineage2.2.1 | None | SRR24255915 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832551 | MDR-TB | lineage2.2.1 | None | SRR6832564 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866414 | MDR-TB | lineage2.2.1 | None | ERR5866413 | MDR-TB | lineage2.2.1 | None | SRR13180199 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822398 | Pre-XDR-TB | lineage2.2.1 | ua | ERR4829066 | MDR-TB | lineage2.2.1 | ng | SRR7829579 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832428 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539330 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822555 | MDR-TB | lineage2.2.1 | ua | ERR2600510 | MDR-TB | lineage2.2.1 | None | SRR29539592 | MDR-TB | lineage2.2.1 | None | SRR16088417 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255977 | MDR-TB | lineage2.2.1 | None | ERR12790847 | MDR-TB | lineage2.2.1 | None | ERR4829065 | MDR-TB | lineage2.2.1 | ng | SRR29681467 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828779 | Pre-XDR-TB | lineage2.2.1 | None | ERR7975655 | MDR-TB | lineage2.2.1 | None | ERR2516848 | MDR-TB | lineage3.1.2 | gb | ERR2307368 | MDR-TB | lineage2.2.1 | None | SRR6832381 | MDR-TB | lineage2.2.1 | None | ERR2600530 | MDR-TB | lineage2.2.1 | None | ERR5866140 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284564 | MDR-TB | lineage2.2.1 | None | SRR29681216 | MDR-TB | lineage2.2.1 | None | SRR29539622 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539856 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715070 | MDR-TB | lineage2.2.1 | None | SRR16088350 | MDR-TB | lineage2.2.1 | None | SRR28239883 | MDR-TB | lineage2.2.1 | None | SRR24256098 | MDR-TB | lineage2.2.1 | None | ERR2510254 | Pre-XDR-TB | lineage2.2.1 | it | SRR3085248 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068853 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865725 | MDR-TB | lineage2.2.1 | None | SRR21727886 | MDR-TB | lineage2.2.1 | None | SRR5153214 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866090 | MDR-TB | lineage2.2.1 | None | ERR2307562 | MDR-TB | lineage2.2.1 | None | SRR15901693 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539587 | MDR-TB | lineage2.2.1 | None | SRR29539595 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243535 | MDR-TB | lineage2.2.1 | None | ERR11044362 | MDR-TB | lineage2.2.1 | None | ERR13276132 | MDR-TB | lineage2.2.1 | None | ERR11243537 | MDR-TB | lineage2.2.1 | None | ERR7975664 | MDR-TB | lineage2.2.1 | None | SRR29539029 | MDR-TB | lineage2.2.1 | None | SRR29539332 | MDR-TB | lineage2.2.1 | None | SRR24256190 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256052 | MDR-TB | lineage2.2.1 | None | ERR4828774 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828972 | MDR-TB | lineage2.2.1 | None | SRR6797456 | MDR-TB | lineage3.1.2 | None | ERR13284301 | MDR-TB | lineage2.2.1 | None | SRR29539812 | XDR-TB | lineage2.2.1 | None | ERR2307520 | MDR-TB | lineage2.2.1 | None | SRR7516422 | MDR-TB | lineage2.2.1 | None | ERR5866141 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082300 | MDR-TB | lineage4.2.2.1 | None | SRR6832777 | MDR-TB | lineage2.2.1 | None | ERR757169 | MDR-TB | lineage4.1.2.1.1 | ar | ERR4828787 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831843 | MDR-TB | lineage2.2.1 | None | SRR6832856 | MDR-TB | lineage2.2.1 | None | ERR4827420 | MDR-TB | lineage2.2.1 | None | ERR2516438 | MDR-TB | lineage2.2.1 | nl | SRR28239538 | MDR-TB | lineage2.2.1 | None | ERR5865901 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256077 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831297 | MDR-TB | lineage2.2.1 | de | ERR11082301 | HR-TB | lineage4.2.2.1 | None | SRR24256299 | MDR-TB | lineage2.2.1 | None | SRR24827314 | MDR-TB | lineage2.2.1 | None | SRR6832362 | MDR-TB | lineage2.2.1 | None | ERR13289431 | MDR-TB | lineage2.2.1 | None | SRR29539235 | MDR-TB | lineage2.2.1 | None | SRR16087906 | MDR-TB | lineage2.2.1 | None | SRR29539510 | MDR-TB | lineage2.2.1 | None | SRR6831995 | MDR-TB | lineage2.2.1 | None | SRR14782630 | HR-TB | lineage2.2.1 | None | ERR5866412 | MDR-TB | lineage2.2.1 | None | SRR6832114 | MDR-TB | lineage2.2.1 | None | SRR6832561 | MDR-TB | lineage2.2.1 | None | SRR28498601 | MDR-TB | lineage2.2.1 | None | SRR5153310 | MDR-TB | lineage2.2.1 | None | SRR16088577 | MDR-TB | lineage2.2.1 | None | SRR6832017 | MDR-TB | lineage2.2.1 | None | SRR18714924 | MDR-TB | lineage2.2.1 | None | SRR29539016 | HR-TB | lineage2.2.1 | None | ERR11068618 | MDR-TB | lineage2.2.1 | None | SRR24256039 | MDR-TB | lineage2.2.1 | None | SRR6832216 | MDR-TB | lineage2.2.1 | None | SRR29539773 | Pre-XDR-TB | lineage2.2.1 | None | SRR28239542 | MDR-TB | lineage2.2.1 | None | SRR28239537 | MDR-TB | lineage2.2.1 | None | SRR6832844 | MDR-TB | lineage2.2.1 | None | ERR4829067 | MDR-TB | lineage2.2.1 | ng | ERR4829372 | Pre-XDR-TB | lineage2.2.1 | it | ERR2600509 | MDR-TB | lineage2.2.1 | None | ERR4553749 | RR-TB | None | SRR6832740 | MDR-TB | lineage2.2.1 | None | SRR29539412 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832288 | Pre-XDR-TB | lineage2.2.1 | None |
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