lineage | Count |
---|---|
lineage2.2.1 | 85 |
lineage4.3.3 | 1 |
lineage4;lineage2 | 2 |
lineage4.9;lineage2.2.1 | 4 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 93 |
ID | Drug resistance | Lineage | Country iso2 | ERR4423537 | MDR-TB | lineage2.2.1 | None | ERR4423538 | MDR-TB | lineage2.2.1 | None | ERR5918062 | MDR-TB | lineage2.2.1 | za | ERR5987206 | MDR-TB | lineage2.2.1 | None | ERR5987218 | MDR-TB | lineage2.2.1 | None | ERR5987221 | MDR-TB | lineage2.2.1 | None | ERR5987240 | MDR-TB | lineage2.2.1 | None | ERR5987428 | MDR-TB | lineage2.2.1 | None | ERR5987436 | MDR-TB | lineage2.2.1 | None | ERR5987448 | MDR-TB | lineage2.2.1 | None | ERR6052068 | MDR-TB | lineage2.2.1 | None | ERR6052077 | MDR-TB | lineage2.2.1 | None | ERR6362288 | MDR-TB | lineage2.2.1 | None | ERR6362477 | MDR-TB | lineage2.2.1 | None | ERR8975890 | MDR-TB | lineage2.2.1 | None | ERR7362004 | MDR-TB | lineage2.2.1 | None | ERR7737661 | MDR-TB | lineage2.2.1 | None | ERR7911075 | MDR-TB | lineage2.2.1 | za | ERR7911589 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911592 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911698 | Pre-XDR-TB | lineage2.2.1 | za | ERR8774124 | MDR-TB | lineage2.2.1 | None | ERR8774122 | MDR-TB | lineage2.2.1 | None | ERR8975762 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119799 | MDR-TB | lineage2.2.1 | None | ERR9119717 | MDR-TB | lineage2.2.1 | None | ERR9119821 | MDR-TB | lineage2.2.1 | None | ERR9119928 | MDR-TB | lineage2.2.1 | None | ERR9119894 | MDR-TB | lineage2.2.1 | None | ERR9120008 | MDR-TB | lineage2.2.1 | None | ERR9120009 | MDR-TB | lineage2.2.1 | None | ERR9120011 | MDR-TB | lineage2.2.1 | None | ERR9120016 | MDR-TB | lineage2.2.1 | None | ERR9120010 | MDR-TB | lineage2.2.1 | None | SRR11349162 | MDR-TB | lineage2.2.1 | None | ERR9120017 | MDR-TB | lineage2.2.1 | None | ERR9992652 | XDR-TB | lineage2.2.1 | None | ERR9992653 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992671 | XDR-TB | lineage2.2.1 | None | ERR9992965 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992966 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993055 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993060 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993163 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993185 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869246 | MDR-TB | lineage2.2.1 | None | SRR1165220 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173211 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167297 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173266 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180926 | MDR-TB | lineage2.2.1 | None | SRR1181050 | MDR-TB | lineage2.2.1 | None | SRR16156816 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156836 | MDR-TB | lineage2.2.1 | None | SRR21240221 | Sensitive | lineage4.3.3 | None | ERR9806615 | Pre-XDR-TB | lineage2.2.1 | None | ERR5758477 | MDR-TB | lineage2.2.1 | None | ERR9806664 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806741 | HR-TB | lineage4;lineage2 | None | ERR9806923 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610118 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610239 | MDR-TB | lineage4.9;lineage2.2.1 | None | ERR10610241 | MDR-TB | lineage4.9;lineage2.2.1 | None | ERR8025726 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025737 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806609 | MDR-TB | lineage2.2.1 | None | ERR9806697 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806747 | MDR-TB | lineage4.9;lineage2.2.1 | None | ERR9806751 | MDR-TB | lineage4.9;lineage2.2.1 | None | ERR10610098 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610183 | MDR-TB | lineage2.2.1 | None | ERR10610191 | HR-TB | lineage2.2.1 | None | ERR10610213 | HR-TB | lineage4;lineage2 | None | ERR10610276 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02053752 | MDR-TB | lineage2.2.1 | za | SAMN02403469 | MDR-TB | lineage2.2.1 | za | ERR2515758 | MDR-TB | lineage2.2.1 | za | SAMN02403468 | Pre-XDR-TB | lineage2.2.1 | za | ERR551621 | MDR-TB | lineage2.2.1 | sz | ERR2652990 | MDR-TB | lineage4.1.2.1 | None | SRR924240 | MDR-TB | lineage2.2.1 | None | SRR833061 | MDR-TB | lineage2.2.1 | None | SRR847786 | MDR-TB | lineage2.2.1 | za | SRR833096 | MDR-TB | lineage2.2.1 | None | SRR9971137 | MDR-TB | lineage2.2.1 | None | ERR1035082 | MDR-TB | lineage2.2.1 | None | ERR10748189 | MDR-TB | lineage2.2.1 | None | ERR1035084 | MDR-TB | lineage2.2.1 | za | ERR10748262 | MDR-TB | lineage2.2.1 | None | ERR10748333 | MDR-TB | lineage2.2.1 | None | ERR10748446 | MDR-TB | lineage2.2.1 | None | ERR10748452 | MDR-TB | lineage2.2.1 | None | ERR10748497 | MDR-TB | lineage2.2.1 | None |
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