Rv3855 - c.-579G>T
Drug resistance types
67 Sensitive
4 RR-TB
13 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 61 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 6 |
| lineage2.2.1 | 10 |
| lineage3 | 6 |
| lineage4.3.3 | 3 |
| lineage1.1.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4 | 15 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.1.1 | 3 |
| lineage2.2 | 1 |
| lineage2.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 114 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2229120 | Other | lineage4.8 | None | ERR4818067 | HR-TB | lineage4.8 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR2503466 | Sensitive | lineage4.1.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2513895 | Sensitive | lineage4.8 | None | ERR2512801 | Sensitive | lineage3 | None | ERR2229611 | Sensitive | lineage4.8 | None | ERR2513348 | Other | lineage3 | None | ERR2513717 | Other | lineage2.2.1 | None | ERR4822017 | HR-TB | lineage2.2.1 | None | ERR4819366 | Sensitive | lineage4.3.3 | None | ERR2514197 | RR-TB | lineage1.1.1.1 | None | ERR2517261 | Other | lineage4.2.2.2 | nl | ERR2517346 | Sensitive | lineage4.1.2.1 | nl | SRR6485094 | MDR-TB | lineage2.2.1 | None | ERR4827899 | Sensitive | lineage2.2.1 | None | ERR4827453 | Other | lineage4.1.2.1 | None | SRR6257066 | MDR-TB | lineage4.3.3 | None | SRR6485129 | MDR-TB | lineage2.2.1 | None | SRR6785189 | Other | lineage4.1.2.1 | None | SRR6257068 | Sensitive | lineage2.2.1 | None | SRR7517718 | HR-TB | lineage3 | None | SRR6785547 | Sensitive | lineage4.2.1 | None | SRR6785330 | Other | lineage2.2.1 | None | SRR1002695 | Sensitive | lineage2.2.1 | None | SRR1002693 | MDR-TB | lineage4.3.3 | None | ERR4132447 | HR-TB | lineage4 | None | SRR11972166 | Sensitive | lineage1.1.3.1 | None | SRR11972165 | MDR-TB | lineage2.2.1.1 | None | SRR10272572 | Sensitive | lineage4.4.1.1 | None | SRR11972429 | RR-TB | lineage2.2 | None | SRR11972363 | MDR-TB | lineage2.2.1 | None | SRR14088363 | HR-TB | lineage3 | None | ERR8025719 | Pre-XDR-TB | lineage2.2.2 | None | SRR14088362 | Sensitive | lineage3 | None | SRR14088389 | MDR-TB | lineage3 | None | SRR20995191 | Sensitive | lineage4.4.1.1 | None | ERR2228894 | Sensitive | lineage4.8 | None | ERR4814442 | Other | lineage4.4.1.1 | None | ERR4814642 | Sensitive | lineage1.2.2.2 | None | ERR4814658 | Sensitive | lineage4.1.2.1 | None | ERR2229547 | Sensitive | lineage4.8 | None | ERR2228957 | Sensitive | lineage4.8 | None | ERR2228999 | Sensitive | lineage4.8 | None | ERR4815948 | Other | lineage4.8 | None | ERR2229553 | Sensitive | lineage4.8 | None | ERR2229074 | HR-TB | lineage4 | None | ERR2229027 | Sensitive | lineage4.8 | None | ERR2229050 | HR-TB | lineage4.8 | None | ERR2229745 | HR-TB | lineage4.8 | None | ERR2229076 | Other | lineage4 | None | ERR2229086 | Sensitive | lineage4.8 | None | ERR2229180 | Other | lineage4 | None | ERR2229102 | Sensitive | lineage4.8 | dk | ERR4816204 | Sensitive | lineage4.2.2 | None | ERR2229132 | RR-TB | lineage4.8 | None | ERR2229587 | Sensitive | lineage4.8 | None | ERR2229584 | Other | lineage4.8 | None | ERR2229589 | HR-TB | lineage4.8 | None | ERR2229172 | Sensitive | lineage4 | None | ERR2229599 | Sensitive | lineage4.8 | None | ERR2229090 | Other | lineage4.8 | None | ERR2229096 | Sensitive | lineage4 | None | ERR2229105 | HR-TB | lineage4.8 | None | ERR2229138 | Other | lineage4 | None | ERR2229142 | HR-TB | lineage4.8 | None | ERR2229588 | Sensitive | lineage4.8 | None | ERR2229163 | Sensitive | lineage4 | None | ERR2229161 | HR-TB | lineage4 | None | ERR2229592 | Sensitive | lineage4.8 | None | ERR2229594 | Other | lineage4 | None | ERR2229171 | Sensitive | lineage4 | None | ERR2229768 | Sensitive | lineage4 | None | ERR2229190 | Sensitive | lineage4.8 | None | ERR2229766 | Sensitive | lineage4.8 | None | ERR2229184 | Sensitive | lineage4.8 | None | ERR2229248 | Sensitive | lineage4.8 | None | ERR2229628 | Sensitive | lineage4.8 | None | ERR2229632 | Sensitive | lineage4.8 | None | ERR2229313 | Sensitive | lineage4.8 | None | ERR2229635 | Sensitive | lineage4.8 | None | ERR2229633 | Sensitive | lineage4.8 | None | ERR2229650 | Sensitive | lineage4.8 | None | ERR2229322 | Sensitive | lineage4.8 | None | ERR2229323 | Sensitive | lineage4.8 | None | ERR2229371 | Sensitive | lineage4.8 | None | ERR2229659 | Sensitive | lineage4.8 | None | ERR2229343 | Sensitive | lineage4.8 | dk | ERR2229376 | Other | lineage4.8 | None | ERR2229372 | Sensitive | lineage4.8 | dk | ERR2229381 | Sensitive | lineage4.8 | None | ERR2229370 | Sensitive | lineage4.8 | None | ERR2229375 | Sensitive | lineage4.8 | dk | ERR2229786 | Sensitive | lineage4.8 | None | ERR2229394 | Other | lineage4.8 | None | ERR2229391 | Other | lineage4.8 | None | ERR2229380 | Sensitive | lineage4.8 | None | ERR2229393 | Other | lineage4.8 | None | ERR2229418 | Sensitive | lineage4.8 | None | ERR2229414 | Sensitive | lineage4.8 | None | ERR2229438 | Sensitive | lineage4.8 | None | ERR2229435 | HR-TB | lineage4.8 | None | ERR2229428 | Sensitive | lineage4.8 | None | ERR2229802 | Sensitive | lineage4.8 | None | ERR2229476 | Sensitive | lineage4.8 | None | ERR2229711 | Sensitive | lineage4.8 | None | ERR2229484 | Sensitive | lineage4 | None | ERR2229499 | Sensitive | lineage4 | None | ERR2228831 | RR-TB | lineage4.8 | None | ERR2229496 | Sensitive | lineage4 | None | ERR2229521 | Sensitive | lineage4.8 | None | ERR2229497 | Sensitive | lineage4.8 | None | ERR2510812 | Other | lineage4.1.2.1 | None |
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