lineage | Count |
---|---|
lineage3.1.2 | 4 |
lineage3 | 8 |
lineage2.2.1 | 1 |
lineage4.8 | 7 |
lineage3.1.1 | 7 |
lineage1.1.2 | 2 |
lineage1.1.3.2 | 3 |
lineage4.3.4.2.1 | 1 |
lineage7 | 3 |
lineage1.1.3 | 1 |
lineage4.1.2.1 | 2 |
lineage2.2.2 | 1 |
lineage4.1.1.3 | 1 |
lineage1.2.2 | 1 |
La1.8.1 | 1 |
lineage4.1.1 | 6 |
lineage4.8.2 | 6 |
lineage4.1.1.3.1 | 13 |
lineage4.8.1 | 1 |
lineage4.6.2.2 | 1 |
lineage1.2.2.1 | 3 |
lineage4.6.2.1 | 1 |
spoligotype | Count |
---|---|
None | 74 |
ID | Drug resistance | Lineage | Country iso2 | SRR2100087 | Sensitive | lineage3.1.2 | None | SRR2100080 | Sensitive | lineage3.1.2 | None | SRR2100091 | Sensitive | lineage3 | None | SRR2100079 | Sensitive | lineage3 | None | ERR245696 | Sensitive | lineage2.2.1 | mw | SRR2469374 | Sensitive | lineage4.8 | None | ERR1200609 | Sensitive | lineage3 | et | ERR245704 | Sensitive | lineage3.1.1 | mw | ERR245699 | Sensitive | lineage1.1.2 | mw | ERR245701 | Other | lineage4.8 | mw | ERR245760 | Sensitive | lineage1.1.3.2 | mw | ERR245781 | Sensitive | lineage1.1.3.2 | mw | ERR245806 | Sensitive | lineage4.8 | mw | ERR245801 | Other | lineage4.3.4.2.1 | None | ERR245820 | Sensitive | lineage1.1.3.2 | None | ERR245819 | Other | lineage3.1.1 | None | ERR1200610 | Sensitive | lineage7 | et | ERR245825 | Sensitive | lineage1.1.3 | None | ERR1200638 | Sensitive | lineage3 | et | ERR1200635 | Sensitive | lineage7 | et | ERR233354 | Sensitive | lineage7 | None | ERR233358 | RR-TB | lineage4.1.2.1 | mx | ERR233359 | Sensitive | lineage2.2.2 | kr | ERR245823 | Sensitive | lineage4.1.1.3 | None | ERR245836 | MDR-TB | lineage1.2.2 | mw | ERR233347 | Sensitive | lineage3 | None | ERR046749 | Other | La1.8.1 | gb | ERR046733 | Sensitive | lineage4.1.1 | gb | ERR046745 | Sensitive | lineage4.1.1 | gb | ERR046746 | Sensitive | lineage4.1.1 | gb | ERR040088 | Sensitive | lineage3.1.1 | gb | ERR046734 | Sensitive | lineage4.1.1 | gb | ERR046758 | Sensitive | lineage4.8.2 | gb | ERR046761 | Sensitive | lineage4.8.2 | gb | ERR046785 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046771 | Sensitive | lineage3.1.1 | gb | ERR046789 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046775 | Sensitive | lineage3.1.1 | gb | ERR046778 | HR-TB | lineage4.8.1 | gb | ERR046788 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046792 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046786 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046790 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046791 | Sensitive | lineage4.1.1.3.1 | gb | ERR046798 | Sensitive | lineage4.1.1.3.1 | gb | ERR046810 | Sensitive | lineage3.1.2 | None | ERR046795 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046822 | Sensitive | lineage4.1.1.3.1 | gb | ERR046805 | Sensitive | lineage3 | None | ERR046818 | Sensitive | lineage3.1.2 | None | ERR046834 | HR-TB | lineage4.6.2.2 | gb | ERR046829 | Sensitive | lineage3 | None | ERR046831 | Sensitive | lineage4.8 | gb | ERR046833 | Sensitive | lineage4.8 | gb | ERR046848 | Sensitive | lineage1.2.2.1 | gb | ERR046839 | Sensitive | lineage4.6.2.1 | gb | ERR046844 | Other | lineage1.2.2.1 | gb | ERR046873 | Sensitive | lineage4.1.2.1 | gb | ERR046851 | Sensitive | lineage4.1.1.3.1 | gb | ERR046858 | Sensitive | lineage3.1.1 | gb | ERR046876 | Sensitive | lineage4.8.2 | gb | ERR046841 | Sensitive | lineage4.1.1 | gb | ERR046854 | Sensitive | lineage3.1.1 | gb | ERR046879 | Sensitive | lineage4.8.2 | gb | ERR046896 | Sensitive | lineage1.1.2 | None | ERR046877 | Sensitive | lineage4.8.2 | gb | ERR046883 | Sensitive | lineage3 | gb | ERR046886 | Sensitive | lineage1.2.2.1 | None | ERR046913 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046899 | Sensitive | lineage4.8 | None | ERR046919 | Sensitive | lineage4.1.1.3.1 | gb | ERR046903 | Pre-XDR-TB | lineage4.8 | gb | ERR046920 | Sensitive | lineage4.8.2 | gb | ERR046916 | Sensitive | lineage4.1.1 | gb |
---|