Rv3862c - c.-100G>A
Drug resistance types
23 Sensitive
0 RR-TB
9 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 14 |
| lineage4.2.1.1 | 8 |
| lineage4.1.2.1 | 4 |
| lineage2.2.2 | 3 |
| lineage3 | 2 |
| lineage4.1.2 | 3 |
| lineage1.2.1.2.1 | 2 |
| lineage4.3.3 | 1 |
| lineage3;lineage4.1.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13583448 | HR-TB | lineage4.8 | None | SRR29050663 | MDR-TB | lineage4.8 | None | SAMN02419619 | Sensitive | lineage4.2.1.1 | by | SRR21690672 | Sensitive | lineage4.1.2.1 | None | SRR25515797 | HR-TB | lineage2.2.2 | None | SRR25515673 | Sensitive | lineage2.2.2 | None | SRR13583405 | MDR-TB | lineage4.8 | None | SRR14782257 | Sensitive | lineage4.8 | None | SRR29051352 | HR-TB | lineage4.8 | None | SRR29051264 | HR-TB | lineage4.8 | None | SRR28859925 | Sensitive | lineage3 | None | ERR4798742 | Sensitive | lineage3 | in | SRR26400035 | Other | lineage4.1.2 | None | SRR1510044 | Sensitive | lineage1.2.1.2.1 | None | ERR5917693 | Sensitive | lineage4.2.1.1 | by | SRR24673581 | Sensitive | lineage4.3.3 | None | SRR13583412 | HR-TB | lineage4.8 | None | SRR13583460 | HR-TB | lineage4.8 | None | ERR5979489 | Sensitive | lineage4.1.2.1 | None | SRR1169019 | Sensitive | lineage4.2.1.1 | None | SRR10851700 | Sensitive | lineage4.8 | None | SRR13583456 | MDR-TB | lineage4.8 | None | ERR9125166 | Sensitive | lineage1.2.1.2.1 | None | SRR22048437 | Sensitive | lineage4.2.1.1 | None | SRR28351560 | Sensitive | lineage3;lineage4.1.1.1 | None | SRR5709946 | Sensitive | lineage1.1.1 | th | SRR19304100 | Sensitive | lineage4.2.1.1 | None | SRR19304112 | Sensitive | lineage4.2.1.1 | None | SRR5073785 | Other | lineage4.1.2 | vn | SRR5073536 | Sensitive | lineage2.2.1 | vn | SRR5073999 | Other | lineage4.1.2 | vn | SRR29231587 | Sensitive | lineage4.8 | None | ERR3276233 | Sensitive | lineage4.1.2.1 | nl | SRR1723420 | HR-TB | lineage2.2.2 | cn | SRR29050640 | MDR-TB | lineage4.8 | None | SRR1172286 | Other | lineage4.2.1.1 | None | ERR5979502 | Sensitive | lineage4.1.2.1 | None | SRR29051019 | HR-TB | lineage4.8 | None | SRR24710268 | Sensitive | lineage4.2.1.1 | None | SRR29050911 | HR-TB | lineage4.8 | None |
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