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SRA data
Rv3862c
- c.-109C>T
Drug resistance types
11 Sensitive
0 RR-TB
0 HR-TB
0 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
La2
8
lineage1.2.1.2.1
1
La2;lineage4.9
1
lineage1.1.3
1
lineage1.2.2.2
1
Showing 1 to 5 of 5 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
12
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11043764
Sensitive
lineage1.2.1.2.1
None
ERR551023
Sensitive
La2
cg
ERR551024
Sensitive
La2
None
ERR551705
Sensitive
La2
None
ERR551706
Sensitive
La2
cg
SRR12404592
Sensitive
La2
None
SRR24827285
Sensitive
La2
None
SRR25340907
Pre-XDR-TB
lineage1.2.2.2
None
SRR29053382
Sensitive
La2
None
SRR650221
Sensitive
La2
None
Showing 1 to 10 of 12 entries
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