Rv3862c - c.-72C>T
Drug resistance types
22 Sensitive
0 RR-TB
6 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
45 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 2 |
| La1.8.1 | 45 |
| lineage2.2.1 | 3 |
| lineage4.1.2.1 | 4 |
| lineage4.1.1.3 | 2 |
| lineage4.6 | 3 |
| lineage5.1.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.4 | 4 |
| lineage1.1.2 | 1 |
| lineage1.1.1.1;lineage1.2.1.2.1 | 1 |
| lineage1.2.2.2 | 5 |
| lineage5.1.5 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 75 |
Geographic prevalence
Country level data for this variant is available for 20 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5067715 | Sensitive | lineage2.2.2 | vn | SRR14296331 | Other | La1.8.1 | None | SRR21277181 | Sensitive | lineage2.2.1 | None | SRR5657493 | Other | La1.8.1 | mx | SRR14296400 | Other | La1.8.1 | None | SRR5657402 | Other | La1.8.1 | mx | ERR9121357 | Sensitive | lineage4.1.2.1 | None | ERR8686594 | Sensitive | lineage4.1.1.3 | None | SRR14296156 | Other | La1.8.1 | None | SRR14296199 | Other | La1.8.1 | None | SRR14296320 | Other | La1.8.1 | None | ERR9117692 | Sensitive | lineage4.6 | None | SRR14296231 | Other | La1.8.1 | None | SRR14296296 | Other | La1.8.1 | None | ERR3170459 | Sensitive | lineage5.1.1 | gh | SRR5657462 | Other | La1.8.1 | mx | SRR14296201 | Other | La1.8.1 | None | SRR14296107 | Other | La1.8.1 | None | SRR14296198 | Other | La1.8.1 | None | SRR5657445 | Other | La1.8.1 | mx | SRR14296163 | Other | La1.8.1 | None | SRR14296330 | Other | La1.8.1 | None | SRR8380862 | MDR-TB | lineage2.2.1.1 | in | ERR2843475 | HR-TB | lineage4.4 | None | SRR14296307 | Other | La1.8.1 | None | SRR5074139 | Sensitive | lineage2.2.2 | vn | SRR22249523 | HR-TB | lineage1.1.2 | None | SRR14296289 | Other | La1.8.1 | None | SRR14296091 | Other | La1.8.1 | None | SRR5657443 | Other | La1.8.1 | mx | SRR26399976 | HR-TB | lineage1.1.1.1;lineage1.2.1.2.1 | None | SRR14296304 | Other | La1.8.1 | None | SRR7236298 | Other | La1.8.1 | None | SRR1172831 | Sensitive | lineage1.2.2.2 | None | SRR13180205 | Sensitive | lineage4.1.2.1 | None | SRR14296329 | Other | La1.8.1 | None | ERR2791559 | Sensitive | lineage4.6 | None | SRR1172773 | Sensitive | lineage1.2.2.2 | None | SRR14296194 | Other | La1.8.1 | None | SAMN02599171 | Sensitive | lineage1.2.2.2 | in | SRR5657481 | Other | La1.8.1 | mx | ERR2791539 | Sensitive | lineage4.6 | None | SRR14296141 | Other | La1.8.1 | None | SRR14296398 | Other | La1.8.1 | None | SRR14296401 | Other | La1.8.1 | None | SRR5073571 | Sensitive | lineage2.2.1 | vn | SRR11348177 | Sensitive | lineage1.2.2.2 | None | SRR14296193 | Other | La1.8.1 | None | SRR5657383 | Other | La1.8.1 | mx | SRR7236311 | Other | La1.8.1 | None | ERR751311 | Sensitive | lineage5.1.5 | gh | SRR14296308 | Other | La1.8.1 | None | SRR5657405 | Other | La1.8.1 | mx | ERR2843474 | HR-TB | lineage4.4 | None | SRR14296292 | Other | La1.8.1 | None | SRR14296151 | Other | La1.8.1 | None | SRR5657444 | Other | La1.8.1 | None | SRR15369001 | MDR-TB | lineage2.2.1 | None | SRR14296428 | Other | La1.8.1 | None | SRR14296272 | Other | La1.8.1 | None | SRR14296378 | Other | La1.8.1 | None | SRR14296402 | Other | La1.8.1 | None | ERR4195389 | Sensitive | lineage4.1.2.1 | None | SRR5657463 | Other | La1.8.1 | mx | SRR14296368 | Other | La1.8.1 | None | ERR8699750 | Sensitive | lineage4.1.1.3 | None | ERR4796719 | Sensitive | lineage1.2.2.2 | in | ERR11082895 | Sensitive | lineage4.1.2.1 | None | SRR14296369 | Other | La1.8.1 | None | SRR14296353 | Other | La1.8.1 | None | ERR4828465 | HR-TB | lineage4.4 | vn | ERR4024810 | Sensitive | lineage4.8 | None | SRR5709851 | Sensitive | lineage2.2.1.1 | th | ERR4828504 | HR-TB | lineage4.4 | vn | SRR14296426 | Other | La1.8.1 | None |
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