Rv3862c - p.Asp108His
Drug resistance types
171 Sensitive
1 RR-TB
28 HR-TB
41 MDR-TB
18 Pre-XDR-TB
1 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2 | 1 |
| lineage4.2.2.1 | 2 |
| lineage2.2.1 | 67 |
| lineage3 | 19 |
| lineage4.3.3 | 22 |
| lineage4.1.2.1 | 28 |
| lineage4.8 | 46 |
| lineage4.6.5 | 1 |
| lineage4.5 | 7 |
| lineage1.1.1.1 | 1 |
| lineage1.1.2 | 6 |
| lineage4 | 6 |
| La1.8.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage3.1.2 | 1 |
| lineage3;lineage1.1.2 | 1 |
| La1.8.2 | 4 |
| lineage4.7 | 2 |
| La1.2 | 3 |
| lineage4.9 | 2 |
| lineage3.1.1 | 3 |
| lineage1.2.2.1 | 1 |
| lineage4.1.2 | 7 |
| lineage4.2.2.2 | 2 |
| lineage4.3.4.1 | 4 |
| lineage4.3.4.2 | 9 |
| lineage4.3.2 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.2.1.1 | 8 |
| lineage4.2.1 | 15 |
| lineage4.4.1.2 | 1 |
| La1.7.X-unk4 | 2 |
| lineage1.2.1.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.2.2.2;lineage2.2.1 | 1 |
| lineage4.4.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2.2 | 1 |
| La1.2.BCG | 1 |
| lineage4.3.3;lineage2.2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1 | 2 |
| lineage4.8;lineage2.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.6.2 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 299 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11082859 | Sensitive | lineage4.2.2 | None | ERR11083005 | HR-TB | lineage4.2.2.1 | None | SRR23861980 | Sensitive | lineage2.2.1 | None | SRR23938596 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829238 | Sensitive | lineage3 | None | ERR11049336 | Sensitive | lineage4.3.3 | None | ERR11049774 | Sensitive | lineage3 | None | ERR11049332 | Sensitive | lineage4.1.2.1 | None | ERR4872324 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131160 | Sensitive | lineage3 | None | ERR11049807 | Sensitive | lineage4.1.2.1 | None | ERR11049033 | Sensitive | lineage4.8 | None | ERR11049114 | HR-TB | lineage4.1.2.1 | None | ERR11049055 | Sensitive | lineage4.3.3 | None | ERR11049048 | Other | lineage4.6.5 | None | ERR11043743 | HR-TB | lineage4.5 | None | ERR11043370 | Sensitive | lineage4.1.2.1 | None | ERR11043178 | Sensitive | lineage1.1.1.1 | None | ERR11043751 | Sensitive | lineage2.2.1 | None | ERR11044884 | Sensitive | lineage4.8 | None | ERR11043790 | Sensitive | lineage1.1.2 | None | ERR11044962 | Sensitive | lineage4 | None | ERR11049415 | Sensitive | lineage4.1.2.1 | None | ERR4627390 | Other | La1.8.1 | None | ERR11049443 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049451 | Sensitive | lineage4.3.3 | None | ERR11049490 | Sensitive | lineage4.6.2.2 | None | ERR4797031 | HR-TB | lineage3 | in | ERR4797042 | MDR-TB | lineage3.1.2 | in | ERR4797039 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797100 | MDR-TB | lineage3;lineage1.1.2 | in | ERR4797074 | Pre-XDR-TB | lineage4.8 | in | ERR6140670 | Other | La1.8.2 | None | ERR11049874 | Sensitive | lineage4.7 | None | ERR6140466 | Other | La1.8.2 | None | ERR11049876 | Sensitive | lineage1.1.2 | None | ERR6140811 | Other | La1.8.2 | None | ERR6140651 | Other | La1.8.2 | None | ERR6201797 | Other | La1.2 | None | ERR6198401 | Other | La1.2 | None | ERR6198210 | Other | La1.2 | None | ERR11049898 | Sensitive | lineage4.1.2.1 | None | ERR11049897 | Sensitive | lineage4.9 | None | ERR11067627 | XDR-TB | lineage2.2.1 | None | ERR11049912 | Sensitive | lineage3.1.1 | None | ERR11049930 | HR-TB | lineage1.2.2.1 | None | ERR11049917 | Sensitive | lineage4.9 | None | ERR11049927 | Sensitive | lineage4.8 | None | ERR11049940 | Sensitive | lineage4.3.3 | None | ERR11049941 | Sensitive | lineage4.1.2.1 | None | ERR11049976 | Other | lineage3 | None | ERR11049955 | HR-TB | lineage4.1.2.1 | None | ERR11049954 | Sensitive | lineage3 | None | ERR11049961 | Sensitive | lineage4.1.2 | None | ERR11049974 | Sensitive | lineage4.2.2.2 | None | ERR11049944 | Sensitive | lineage4.1.2.1 | None | ERR11049949 | Sensitive | lineage4.8 | None | ERR11049951 | Sensitive | lineage2.2.1 | None | ERR11049957 | Sensitive | lineage4.8 | None | ERR11049962 | Sensitive | lineage4 | None | ERR11049963 | Sensitive | lineage4.3.4.1 | None | ERR11049965 | Other | lineage4.6.2.2 | None | ERR11049973 | Sensitive | lineage4.8 | None | ERR7764353 | RR-TB | lineage4.3.4.1 | None | ERR7764342 | Sensitive | lineage4.3.4.2 | None | ERR7764357 | Other | lineage4.3.4.2 | None | ERR7764348 | Other | lineage4.3.2 | None | ERR7764394 | Other | lineage4.8 | None | ERR7764363 | Sensitive | lineage4.3.4.2 | None | ERR7764375 | Sensitive | lineage4.8 | None | ERR7764424 | Other | lineage4.1.1.3 | None | ERR7764395 | Sensitive | lineage4.1.1 | None | ERR11049979 | Sensitive | lineage4.8 | None | ERR11049983 | Sensitive | lineage3 | None | ERR11049981 | Sensitive | lineage2.2.1 | None | ERR11049984 | Other | lineage4.5 | None | ERR11049986 | Other | lineage3 | None | ERR11050007 | HR-TB | lineage2.2.1 | None | ERR11050025 | Sensitive | lineage3 | None | ERR11050024 | Sensitive | lineage4.8 | None | ERR11050018 | Sensitive | lineage4.1.2.1 | None | ERR11067635 | Sensitive | lineage4.5 | None | ERR11050030 | Other | lineage6.1.3 | None | ERR9119655 | Sensitive | lineage2.2.1 | None | ERR11050072 | Sensitive | lineage4.2.1.1 | None | ERR9119653 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119656 | HR-TB | lineage2.2.1 | None | ERR11050070 | Sensitive | lineage4.8 | None | ERR11050074 | Other | lineage3 | None | ERR11050086 | HR-TB | lineage4 | None | ERR11050079 | Other | lineage4.1.2 | None | ERR11050083 | Sensitive | lineage4.8 | None | ERR11050076 | MDR-TB | lineage4.2.1 | None | ERR11050081 | HR-TB | lineage4.1.2 | None | ERR11050178 | Sensitive | lineage4.1.2.1 | None | ERR11050088 | Sensitive | lineage4.4.1.2 | None | ERR11050090 | Other | La1.7.X-unk4 | None | ERR11050094 | Sensitive | lineage4.7 | None | ERR11050095 | Sensitive | lineage4.1.2 | None | ERR11050100 | Sensitive | lineage4.1.2.1 | None | ERR11050097 | Sensitive | lineage1.2.1.1 | None | ERR11050099 | Sensitive | lineage1.1.2 | None | ERR11050102 | HR-TB | lineage1.2.1.2 | None | ERR11050104 | Sensitive | lineage3 | None | ERR11050106 | Sensitive | lineage2.2.1 | None | ERR11050140 | Sensitive | lineage4.1.2.1 | None | ERR11050085 | Sensitive | lineage4.8 | None | ERR11050089 | Sensitive | lineage4.3.3 | None | ERR11050092 | Sensitive | lineage4.3.3 | None | ERR11050091 | Sensitive | lineage4.8 | None | ERR11050093 | Sensitive | lineage4.2.2.2;lineage2.2.1 | None | ERR11050098 | Sensitive | lineage4 | None | ERR11050101 | Sensitive | lineage2.2.1 | None | ERR11050107 | Sensitive | lineage4.5 | None | ERR11050113 | Sensitive | lineage2.2.1 | None | ERR11050110 | Sensitive | lineage2.2.1 | None | ERR11050139 | Sensitive | lineage4.8 | None | ERR11050167 | Other | lineage4.4.1 | None | ERR11050207 | MDR-TB | lineage4.3.4.2 | None | ERR11050195 | Sensitive | lineage4.1.2.1 | None | ERR11050204 | Sensitive | lineage4 | None | ERR11050184 | HR-TB | lineage4.3.4.2 | None | ERR11050214 | Sensitive | lineage4.8 | None | ERR11050209 | MDR-TB | lineage4.3.4.2 | None | ERR11050219 | Sensitive | lineage4.5 | None | ERR11050208 | MDR-TB | lineage4.3.4.2 | None | ERR11050230 | Sensitive | lineage4.1.1 | None | SRR10810929 | Sensitive | lineage3 | None | ERR11050236 | Sensitive | lineage4 | None | ERR11050210 | MDR-TB | lineage4.3.4.2 | None | ERR11050234 | HR-TB | lineage4.1.2.1 | None | ERR11050239 | Sensitive | lineage1.1.3.2 | None | ERR11050328 | Other | lineage4.2.1.1 | None | SRR10810930 | Sensitive | lineage3 | None | ERR11050305 | MDR-TB | lineage4.3.4.2 | None | ERR11050367 | HR-TB | lineage4.1.2.1 | None | ERR11050362 | HR-TB | lineage4.3.4.1 | None | ERR11050377 | Sensitive | lineage3 | None | ERR11050472 | Sensitive | lineage3 | None | SRR12006634 | Sensitive | lineage2.2.2 | None | ERR11050514 | Sensitive | lineage3 | None | SRR14781857 | Other | lineage4.8 | None | SRR13232618 | Pre-XDR-TB | lineage2.2.1 | None | SRR14781854 | HR-TB | lineage4.8 | None | SRR14781847 | Sensitive | lineage4.3.3 | None | SRR14781924 | Pre-XDR-TB | lineage2.2.1 | None | SRR14781860 | Sensitive | lineage4.8 | None | SRR14782013 | Sensitive | lineage2.2.1 | None | SRR14781940 | Other | La1.2.BCG | None | SRR14781946 | MDR-TB | lineage2.2.1 | None | SRR14781989 | Sensitive | lineage4.8 | None | SRR14782006 | Sensitive | lineage4.8 | None | SRR14782329 | HR-TB | lineage4.2.1 | None | SRR14782182 | Other | lineage4.2.1.1 | None | SRR14782310 | HR-TB | lineage2.2.1 | None | SRR14782248 | Sensitive | lineage4.3.3 | None | SRR14782325 | MDR-TB | lineage2.2.1 | None | SRR14782358 | MDR-TB | lineage2.2.1 | None | SRR14782419 | Sensitive | lineage4.8 | None | SRR14782414 | Sensitive | lineage4.1.2.1 | None | SRR14782468 | Sensitive | lineage4.1.2 | None | SRR14782474 | MDR-TB | lineage2.2.1 | None | SRR14782469 | MDR-TB | lineage4.2.1 | None | SRR14782506 | Sensitive | lineage4.8 | None | SRR14782492 | Sensitive | lineage4.8 | None | SRR14782495 | Other | lineage2.2.1 | None | SRR14782490 | HR-TB | lineage2.2.1 | None | ERR11050575 | Sensitive | lineage4.2.2.2 | None | SRR14782566 | Sensitive | lineage4.8 | None | SRR14782516 | Sensitive | lineage2.2.1 | None | SRR14782568 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782562 | MDR-TB | lineage2.2.1 | None | SRR14782646 | Other | lineage4.3.3 | None | SRR14782586 | Other | lineage4.2.1.1 | None | SRR14782671 | Sensitive | lineage4.1.2 | None | SRR14782661 | MDR-TB | lineage4.2.1 | None | SRR14782693 | Pre-XDR-TB | lineage4.2.1 | None | SRR14801590 | MDR-TB | lineage4.2.1 | None | ERR11050579 | Sensitive | lineage2.2.1 | None | SRR14801380 | MDR-TB | lineage4.2.1 | None | SRR14801578 | MDR-TB | lineage4.2.1 | None | SRR14801853 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801599 | MDR-TB | lineage4.2.1 | None | SRR14801844 | MDR-TB | lineage4.2.1 | None | ERR11050632 | Sensitive | lineage1.1.2 | None | SRR14801861 | Sensitive | lineage4.3.3 | None | SRR14801866 | Other | lineage4.2.1.1 | None | ERR11050593 | Sensitive | lineage4.8 | None | SRR14801845 | HR-TB | lineage2.2.1 | None | ERR11050631 | Sensitive | lineage1.1.2 | None | SRR16088136 | Sensitive | lineage4.2.1 | None | SRR16088237 | Other | lineage4.3.3;lineage2.2.1 | None | SRR16088131 | Sensitive | lineage2.2.1 | None | SRR16088109 | MDR-TB | lineage2.2.1 | None | SRR16088224 | Sensitive | lineage2.2.1 | None | SRR16088225 | MDR-TB | lineage2.2.1 | None | SRR16088231 | Sensitive | lineage4.2.1.1 | None | SRR16088264 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088243 | Sensitive | lineage4.1.2.1 | None | SRR16088238 | Sensitive | lineage4.2.1 | None | SRR16088448 | MDR-TB | lineage2.2.1 | None | SRR16088444 | MDR-TB | lineage2.2.1 | None | SRR16088435 | Sensitive | lineage4.3.3 | None | SRR16088453 | Sensitive | lineage4.1.2.1 | None | SRR16157105 | Pre-XDR-TB | lineage2.2.1 | None | ERR11050702 | Sensitive | lineage3 | None | ERR11050688 | Sensitive | lineage4.8 | None | ERR11050694 | HR-TB | lineage1.2.1.2.1 | None | ERR11050750 | Sensitive | lineage2.2.1.1 | None | ERR11050707 | Sensitive | lineage3 | None | ERR11050726 | HR-TB | lineage4.1.2.1 | None | ERR11050725 | Sensitive | lineage4.8 | None | ERR11050751 | Sensitive | lineage4.5 | None | SRR18714778 | Sensitive | lineage4.2.1.1 | None | ERR11050764 | Sensitive | lineage3.1.1 | None | SRR18714773 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714786 | Other | lineage4.8 | None | SRR18714768 | Sensitive | lineage4.3.3 | None | SRR18714806 | Sensitive | lineage2.2.1 | None | SRR18714799 | Sensitive | lineage4.3.4.1 | None | SRR18714780 | HR-TB | lineage4.2.1 | None | SRR18714807 | Sensitive | lineage4.3.3 | None | SRR18714840 | Sensitive | lineage4.4.1.1 | None | SRR18714834 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714846 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714907 | Sensitive | lineage4.8 | None | ERR11050765 | Sensitive | lineage6.3.1 | None | SRR18714885 | MDR-TB | lineage4.3.3 | None | SRR18714910 | MDR-TB | lineage2.2.1 | None | SRR18714929 | MDR-TB | lineage4.1 | None | SRR18714915 | MDR-TB | lineage2.2.1 | None | SRR18714943 | Other | lineage4.3.3 | None | SRR18714934 | MDR-TB | lineage2.2.1 | None | SRR18714973 | HR-TB | lineage4.8 | None | SRR18714985 | Sensitive | lineage4.8 | None | SRR18714977 | Sensitive | lineage4.8 | None | SRR18714974 | Sensitive | lineage2.2.1 | None | SRR18714997 | HR-TB | lineage4.8 | None | SRR18715149 | Sensitive | lineage2.2.1 | None | SRR18714999 | Sensitive | lineage4.3.3 | None | SRR18715058 | Sensitive | lineage2.2.1 | None | SRR18715075 | MDR-TB | lineage2.2.1 | None | SRR18715085 | Sensitive | lineage4.8 | None | SRR18715010 | HR-TB | lineage4.2.1 | None | SRR18715065 | MDR-TB | lineage4.1.2.1 | None | SRR18715188 | HR-TB | lineage4.3.3 | None | SRR18715158 | Sensitive | lineage4.8 | None | SRR18715189 | MDR-TB | lineage4.3.3 | None | SRR18715200 | Sensitive | lineage4.8 | None | SRR18715196 | Sensitive | lineage4.3.3 | None | SRR18715198 | MDR-TB | lineage4.1.2.1 | None | SRR18715211 | Sensitive | lineage4.8 | None | SRR18715284 | Sensitive | lineage4.3.3 | None | SRR18715204 | MDR-TB | lineage2.2.1 | None | SRR18715288 | Other | lineage4.8 | None | SRR18715302 | MDR-TB | lineage2.2.1 | None | SRR18715293 | MDR-TB | lineage4.8 | None | SRR18715296 | Sensitive | lineage2.2.1 | None | SRR18715359 | MDR-TB | lineage4.8;lineage2.2.1 | None | SRR18715312 | MDR-TB | lineage2.2.1 | None | SRR18715362 | Sensitive | lineage2.2.1 | None | SRR18715360 | Other | lineage2.2.1 | None | SRR18715357 | MDR-TB | lineage2.2.1 | None | SRR18715395 | Sensitive | lineage4.2.1 | None | SRR18715369 | Other | lineage2.2.1 | None | SRR18715366 | Sensitive | lineage4.3.3 | None | SRR18715368 | Sensitive | lineage4.3.3 | None | SRR18715372 | MDR-TB | lineage2.2.1 | None | SRR18715422 | MDR-TB | lineage2.2.1 | None | ERR11050775 | Sensitive | lineage1.2.1.1 | None | SRR18715406 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715420 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715424 | Sensitive | lineage4.8 | None | SRR18715425 | Sensitive | lineage4.8 | None | SRR18715452 | Sensitive | lineage2.2.1 | None | SRR18715429 | Sensitive | lineage4.1.2.1 | None | SRR18715475 | Other | lineage4.2.1.1 | None | ERR11050779 | Sensitive | lineage4.5 | None | ERR11050802 | Sensitive | lineage4.1.2.1 | None | ERR11050782 | Sensitive | lineage4.1.2.1 | None | ERR11050784 | Sensitive | lineage1.1.1 | None | ERR11050791 | Sensitive | lineage4.1.2 | None | ERR11050789 | Sensitive | lineage4.6.2 | None | ERR11050795 | Sensitive | lineage4.8 | None | ERR11050828 | Sensitive | lineage3.1.1 | None | ERR11050816 | Other | La1.7.1 | None | ERR11050832 | Sensitive | lineage4.1.2.1 | None | ERR11050923 | Sensitive | lineage4.8 | None | ERR11050860 | Sensitive | lineage4.3.2 | None | ERR11050914 | Sensitive | lineage2.2.1 | None | ERR11050918 | Sensitive | lineage1.1.2 | None | ERR11068248 | Sensitive | lineage2.2.1 | None | ERR11067735 | HR-TB | lineage3 | None | ERR11068157 | Sensitive | lineage4.1.2.1 | None | ERR11081472 | Sensitive | lineage4.1 | None | ERR11081090 | Sensitive | lineage4.1.2.1 | None | ERR11081507 | Sensitive | lineage4.8 | None | ERR11081542 | Other | La1.7.X-unk4 | None | ERR11081897 | Sensitive | lineage4.2.2.1 | None |
|---|
