Rv3862c - p.Pro38Leu
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
113 Sensitive
22 RR-TB
11 HR-TB
43 MDR-TB
23 Pre-XDR-TB
1 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 216 |
| lineage2.2.1;lineage4.1.1 | 1 |
| lineage4.5 | 5 |
| lineage2.2.1.1 | 2 |
| lineage3 | 2 |
| lineage2.2.1;lineage4.3.4.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage2.2.1;lineage4.1.1;lineage4.8 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.1.2 | 2 |
| lineage2.2.1;lineage4.3.2 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 240 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16058590 | Sensitive | lineage2.2.1 | None | ERR031471 | Sensitive | lineage2.2.1 | None | ERR6866729 | Sensitive | lineage2.2.1 | None | ERR13260604 | Sensitive | lineage2.2.1 | None | ERR4024925 | Sensitive | lineage2.2.1 | None | SRR20969820 | HR-TB | lineage2.2.1 | None | SRR28394226 | Pre-XDR-TB | lineage2.2.1;lineage4.1.1 | None | ERR13267464 | Sensitive | lineage2.2.1 | None | SRR7069729 | Sensitive | lineage2.2.1 | None | ERR12328179 | Other | lineage2.2.1 | None | SRR10808757 | Sensitive | lineage2.2.1 | None | ERR13260362 | MDR-TB | lineage2.2.1 | None | ERR13261693 | RR-TB | lineage2.2.1 | None | ERR4457768 | Sensitive | lineage2.2.1 | None | ERR9029874 | MDR-TB | lineage2.2.1 | None | ERR13260061 | MDR-TB | lineage2.2.1 | None | ERR6866498 | Sensitive | lineage2.2.1 | None | ERR4178254 | Sensitive | lineage2.2.1 | None | ERR13260509 | MDR-TB | lineage2.2.1 | None | SRR25207161 | Pre-XDR-TB | lineage2.2.1 | None | ERR6865940 | Sensitive | lineage2.2.1 | None | ERR13258450 | Pre-XDR-TB | lineage2.2.1 | None | DRR130160 | MDR-TB | lineage2.2.1 | None | ERR13260642 | RR-TB | lineage2.2.1 | None | ERR6866760 | Sensitive | lineage2.2.1 | None | SRR28394186 | MDR-TB | lineage2.2.1 | None | ERR9125481 | Other | lineage4.5 | None | SRR22461590 | HR-TB | lineage2.2.1 | None | ERR3287873 | MDR-TB | lineage2.2.1 | None | ERR4813567 | RR-TB | lineage2.2.1 | None | ERR6865523 | Sensitive | lineage2.2.1 | None | SRR18911245 | Sensitive | lineage2.2.1 | None | SRR29056027 | Sensitive | lineage2.2.1 | None | ERR4800079 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR12420707 | MDR-TB | lineage4.5 | None | SRR28859794 | Sensitive | lineage2.2.1 | None | ERR13260145 | RR-TB | lineage2.2.1 | None | SRR22251638 | Sensitive | lineage2.2.1 | None | ERR4812937 | Sensitive | lineage2.2.1 | pe | ERR4822371 | MDR-TB | lineage2.2.1 | None | ERR6866757 | Sensitive | lineage2.2.1 | None | ERR2184417 | Sensitive | lineage2.2.1 | pe | ERR4178305 | Sensitive | lineage2.2.1 | None | ERR3287623 | MDR-TB | lineage2.2.1 | pe | ERR3287648 | HR-TB | lineage2.2.1 | pe | SRR28393768 | MDR-TB | lineage2.2.1 | None | ERR4812479 | Sensitive | lineage2.2.1 | pe | ERR3287357 | Other | lineage2.2.1 | pe | ERR4822474 | Sensitive | lineage3 | de | SRR28393409 | HR-TB | lineage2.2.1;lineage4.3.4.1 | None | SRR28393442 | Sensitive | lineage2.2.1 | None | ERR775373 | MDR-TB | lineage2.2.1 | pe | SRR28393839 | HR-TB | lineage2.2.1 | None | ERR4812414 | Other | lineage2.2.1 | pe | ERR4811562 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4813505 | Sensitive | lineage2.2.1 | None | ERR4812676 | Sensitive | lineage2.2.1 | None | ERR751453 | MDR-TB | lineage2.2.1 | pe | ERR751454 | RR-TB | lineage2.2.1 | pe | ERR751376 | Sensitive | lineage2.2.1 | pe | ERR9125129 | Sensitive | lineage2.2.1 | None | ERR4813262 | Sensitive | lineage2.2.1 | pe | ERR4024630 | Sensitive | lineage2.2.1 | None | SRR21732668 | Sensitive | lineage2.2.1 | None | ERR2510220 | Sensitive | lineage2.2.1 | pe | SRR30182366 | Sensitive | lineage2.2.1 | None | SRR29441070 | Sensitive | lineage2.2.1 | None | ERR13292266 | Sensitive | lineage2.2.1 | None | ERR4817614 | Sensitive | lineage4.6.2.2 | None | ERR13260257 | Pre-XDR-TB | lineage2.2.1 | None | ERR6865942 | Other | lineage2.2.1;lineage4.1.1;lineage4.8 | None | SRR26800480 | Sensitive | lineage3 | None | SRR6480611 | Sensitive | lineage2.2.1 | None | SRR10808935 | Sensitive | lineage2.2.1 | None | SRR21709344 | RR-TB | lineage2.2.1 | None | SRR21728176 | Sensitive | lineage2.2.1 | None | DRR130070 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819393 | Sensitive | lineage4.6.2.2 | None | ERR13290998 | MDR-TB | lineage2.2.1 | None | SRR28860135 | Other | lineage2.2.1 | None | ERR13260376 | HR-TB | lineage2.2.1 | None | ERR6866355 | Sensitive | lineage2.2.1 | None | SRR1723852 | MDR-TB | lineage2.2.1 | cn | ERR6865791 | Sensitive | lineage2.2.1 | None | ERR6865871 | Sensitive | lineage2.2.1 | None | ERR13260281 | MDR-TB | lineage2.2.1 | None | ERR6866629 | Other | lineage2.2.1 | None | ERR13260412 | RR-TB | lineage2.2.1 | None | ERR13260316 | MDR-TB | lineage2.2.1 | None | ERR4457771 | Sensitive | lineage2.2.1 | None | SRR21240227 | Sensitive | lineage4.1.2.1 | None | SRR10808599 | Sensitive | lineage2.2.1 | None | ERR6865625 | MDR-TB | lineage2.2.1 | None | ERR6358914 | MDR-TB | lineage4.6.1.2 | None | ERR13262167 | XDR-TB | lineage2.2.1.1 | None | ERR4813157 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260175 | RR-TB | lineage2.2.1 | None | ERR13291350 | Sensitive | lineage2.2.1 | None | SRR6785170 | MDR-TB | lineage2.2.1 | None | ERR4024637 | Sensitive | lineage2.2.1 | None | ERR9125490 | Other | lineage4.5 | None | SRR28394258 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866964 | Sensitive | lineage2.2.1 | None | ERR6866392 | Sensitive | lineage2.2.1 | None | ERR13260544 | RR-TB | lineage2.2.1 | None | ERR13260308 | RR-TB | lineage2.2.1 | None | SRR30182720 | Sensitive | lineage2.2.1 | None | ERR6865798 | Sensitive | lineage2.2.1 | None | SRR19276613 | HR-TB | lineage2.2.1 | None | ERR12118007 | MDR-TB | lineage2.2.1;lineage4 | None | SRR21690967 | Other | lineage4.1.2 | None | SAMEA5570067 | MDR-TB | lineage2.2.1 | None | ERR4024761 | MDR-TB | lineage2.2.1 | None | ERR4025074 | Sensitive | lineage2.2.1 | None | ERR6866744 | Sensitive | lineage2.2.1 | None | ERR2184264 | Other | lineage2.2.1 | pe | SRR25206877 | Pre-XDR-TB | lineage2.2.1 | None | ERR718524 | Sensitive | lineage2.2.1 | th | SRR28393541 | Pre-XDR-TB | lineage2.2.1 | None | SRR18289175 | Sensitive | lineage2.2.1 | None | ERR3287750 | MDR-TB | lineage2.2.1 | pe | ERR4812522 | Other | lineage2.2.1 | pe | ERR718551 | Sensitive | lineage2.2.1 | th | ERR3287476 | MDR-TB | lineage2.2.1 | pe | ERR4812770 | RR-TB | lineage2.2.1 | pe | SRR6152889 | Sensitive | lineage2.2.1 | ca | ERR4812911 | RR-TB | lineage2.2.1 | pe | SRR6152990 | Sensitive | lineage2.2.1 | ca | ERR6866465 | Sensitive | lineage2.2.1 | None | ERR4457765 | Sensitive | lineage2.2.1 | None | ERR4813362 | MDR-TB | lineage2.2.1 | pe | ERR4812417 | Sensitive | lineage2.2.1 | pe | ERR4812789 | Sensitive | lineage2.2.1 | pe | ERR4829877 | RR-TB | lineage2.2.1 | it | SRR21685247 | Sensitive | lineage2.2.1 | None | SRR21685099 | Sensitive | lineage2.2.1 | None | SRR30182863 | Sensitive | lineage2.2.1 | None | ERR234193 | Sensitive | lineage2.2.1 | vn | SRR11662322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4024593 | Other | lineage2.2.1;lineage4.1.1;lineage4.8 | None | SRR22251276 | Sensitive | lineage2.2.1 | None | SRR16915735 | Sensitive | lineage2.2.1 | None | SRR16915745 | HR-TB | lineage2.2.1 | None | ERR6866674 | Sensitive | lineage2.2.1 | None | ERR6866568 | Sensitive | lineage2.2.1 | None | SRR24083671 | Sensitive | lineage2.2.1 | None | ERR4457766 | HR-TB | lineage2.2.1 | None | SRR15315749 | HR-TB | lineage2.2.1 | None | ERR4813555 | RR-TB | lineage2.2.1 | None | ERR6866658 | Sensitive | lineage2.2.1 | None | ERR2184575 | Sensitive | lineage2.2.1 | pe | ERR6865715 | Sensitive | lineage2.2.1 | None | SRR28393590 | MDR-TB | lineage2.2.1 | None | SRR28394256 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866710 | Sensitive | lineage2.2.1 | None | ERR3275757 | Other | lineage4.1.2 | nl | SRR28860105 | Sensitive | lineage2.2.1 | None | ERR4811656 | Other | lineage2.2.1 | pe | ERR13260597 | Sensitive | lineage2.2.1 | None | ERR13260250 | MDR-TB | lineage2.2.1 | None | SRR16058667 | Other | lineage4.5 | None | ERR4178218 | Sensitive | lineage2.2.1 | None | ERR6866680 | Sensitive | lineage2.2.1 | None | SRR28393893 | MDR-TB | lineage2.2.1 | None | ERR12328188 | RR-TB | lineage2.2.1 | None | ERR13291775 | RR-TB | lineage2.2.1 | None | ERR6865484 | Sensitive | lineage2.2.1 | None | ERR6866099 | Other | lineage2.2.1;lineage4.3.2 | None | SRR29127096 | Other | lineage2.2.1 | None | SRR28119762 | Sensitive | lineage2.2.1 | None | ERR4813192 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260352 | MDR-TB | lineage2.2.1 | None | SRR16058657 | Other | lineage4.5 | None | SRR26112336 | Sensitive | lineage2.2.1 | None | SRR21728179 | Sensitive | lineage2.2.1 | None | SRR21276954 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291378 | Sensitive | lineage2.2.1 | None | ERR13260357 | MDR-TB | lineage2.2.1 | None | ERR13259996 | MDR-TB | lineage2.2.1 | None | ERR12117927 | MDR-TB | lineage2.2.1 | None | ERR13260284 | Sensitive | lineage2.2.1 | None | ERR6866712 | Sensitive | lineage2.2.1;lineage4 | None | SRR29124273 | Other | lineage2.2.1 | None | ERR6866614 | Sensitive | lineage2.2.1 | None | ERR4457773 | Sensitive | lineage2.2.1 | None | SRR20969863 | HR-TB | lineage2.2.1 | None | SRR16370373 | Sensitive | lineage2.2.1 | None | ERR6866346 | RR-TB | lineage2.2.1 | None | ERR13261704 | RR-TB | lineage2.2.1 | None | ERR4811701 | Other | lineage2.2.1 | pe | ERR4457767 | Sensitive | lineage2.2.1 | None | SRR26112516 | Sensitive | lineage2.2.1 | None | ERR4829891 | RR-TB | lineage2.2.1 | it | ERR4457772 | Other | lineage2.2.1 | None | ERR3287352 | Sensitive | lineage2.2.1 | pe | SRR16915762 | Sensitive | lineage2.2.1 | None | ERR4811865 | Sensitive | lineage2.2.1;lineage4.1.2.1 | None | ERR775756 | Sensitive | lineage2.2.1 | th | ERR4812089 | Sensitive | lineage2.2.1 | None | ERR3287485 | RR-TB | lineage2.2.1 | pe | ERR3287487 | RR-TB | lineage2.2.1 | pe | SRR28393331 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393975 | MDR-TB | lineage2.2.1 | None | ERR4812281 | Other | lineage2.2.1 | None | ERR4812663 | RR-TB | lineage2.2.1 | None | ERR4812074 | Sensitive | lineage2.2.1 | None | ERR751360 | MDR-TB | lineage2.2.1 | pe | ERR751361 | MDR-TB | lineage2.2.1 | pe | ERR751483 | Pre-XDR-TB | lineage2.2.1 | pe | SRR29126348 | Other | lineage2.2.1 | None | ERR4812506 | Sensitive | lineage2.2.1 | pe | ERR4829033 | Sensitive | lineage2.2.1 | it | ERR4812634 | Sensitive | lineage2.2.1 | None | ERR779910 | MDR-TB | lineage2.2.1 | pe | ERR4813315 | MDR-TB | lineage2.2.1 | None | ERR4813350 | MDR-TB | lineage2.2.1 | pe | ERR2516669 | Pre-XDR-TB | lineage2.2.1 | pe | ERR2516511 | MDR-TB | lineage2.2.1 | pe | ERR2516546 | Pre-XDR-TB | lineage2.2.1 | pe | ERR2516513 | MDR-TB | lineage2.2.1 | pe | ERR2516425 | Pre-XDR-TB | lineage2.2.1 | pe | ERR2516648 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | pe | ERR2516685 | Pre-XDR-TB | lineage2.2.1 | pe | ERR2516721 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4812053 | Sensitive | lineage2.2.1 | pe | ERR4829813 | Other | lineage2.2.1 | it | ERR13260630 | MDR-TB | lineage2.2.1 | None | SRR28394082 | Other | lineage2.2.1 | None | ERR234250 | Sensitive | lineage2.2.1 | None | SRR29096546 | Other | lineage2.2.1 | None | ERR13260591 | MDR-TB | lineage2.2.1 | None | SRR10808379 | Other | lineage2.2.1 | None | ERR4024849 | Sensitive | lineage2.2.1 | None | SRR5067249 | Sensitive | lineage2.2.1 | vn | SRR16915751 | Sensitive | lineage2.2.1 | None | SRR21714043 | Sensitive | lineage2.2.1 | None | ERR4457769 | Sensitive | lineage2.2.1 | None | SRR16915736 | Sensitive | lineage2.2.1 | None | ERR4457770 | Sensitive | lineage2.2.1 | None | SRR8649115 | Sensitive | lineage2.2.1 | None |
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