lineage | Count |
---|---|
lineage2.2.1 | 16 |
lineage2.1 | 1 |
lineage2.2.1.2 | 53 |
lineage2.2.1.2;lineage4.1.1.3 | 1 |
lineage2.2.1.2;lineage3 | 3 |
lineage2.2.1.1;lineage2.2.1.2;lineage3 | 1 |
lineage1.1.2;lineage2.2.1.2 | 1 |
lineage2.2.1.1;lineage3 | 1 |
lineage2.2.1.1;lineage4.3.3 | 1 |
lineage2.2.1.1;lineage4 | 1 |
spoligotype | Count |
---|---|
None | 79 |
ID | Drug resistance | Lineage | Country iso2 | SRR27069422 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR13266530 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR15316019 | MDR-TB | lineage2.2.1 | None | SRR10869190 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797994 | Pre-XDR-TB | lineage2.2.1.2;lineage4.1.1.3 | in | ERR4799487 | Pre-XDR-TB | lineage2.2.1.2 | in | SRR28044339 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR13266903 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR2513295 | MDR-TB | lineage2.2.1.2 | gb | ERR13260957 | MDR-TB | lineage2.2.1.2 | None | SRR5073983 | Sensitive | lineage2.2.1 | vn | SRR25827718 | Pre-XDR-TB | lineage2.2.1.2;lineage3 | None | SRR25827806 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR14782340 | MDR-TB | lineage2.2.1 | None | ERR4810939 | MDR-TB | lineage2.2.1 | cn | SRR25827558 | XDR-TB | lineage2.2.1.1;lineage2.2.1.2;lineage3 | None | ERR4797850 | Pre-XDR-TB | lineage2.2.1.2 | in | SRR25827422 | Pre-XDR-TB | lineage1.1.2;lineage2.2.1.2 | None | ERR4797702 | Pre-XDR-TB | lineage2.2.1 | in | ERR8025733 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796765 | Pre-XDR-TB | lineage2.2.1.2 | in | SRR11662608 | MDR-TB | lineage2.2.1 | None | ERR4796977 | MDR-TB | lineage2.2.1.2 | in | ERR4798170 | MDR-TB | lineage2.2.1.2 | in | SRR25827692 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR12420542 | Sensitive | lineage2.2.1 | None | ERR4798141 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4799809 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4798239 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4800085 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4796965 | Pre-XDR-TB | lineage2.2.1.2 | in | SRR25827318 | XDR-TB | lineage2.2.1.2;lineage3 | None | SRR25827778 | MDR-TB | lineage2.2.1 | None | ERR2516936 | MDR-TB | lineage2.2.1.2 | gb | SRR28045101 | MDR-TB | lineage2.2.1.2 | None | SRR25827563 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | ERR4800482 | MDR-TB | lineage2.2.1.2 | None | SRR28046349 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4796745 | MDR-TB | lineage2.2.1.2 | in | ERR4799232 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4799727 | MDR-TB | lineage2.2.1.2 | in | SRR25827705 | MDR-TB | lineage2.2.1.1;lineage4.3.3 | None | SRR25827870 | XDR-TB | lineage2.2.1.2 | None | ERR8025529 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266583 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4797809 | MDR-TB | lineage2.2.1.2 | in | SRR25827613 | MDR-TB | lineage2.2.1.2 | None | ERR13260937 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4798219 | Pre-XDR-TB | lineage2.2.1.2 | in | SRR7070182 | MDR-TB | lineage2.2.1.2 | None | ERR4796348 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4796735 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR9285974 | Sensitive | lineage2.2.1 | None | ERR4798003 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4797322 | MDR-TB | lineage2.2.1.2 | in | ERR4798352 | Pre-XDR-TB | lineage2.2.1.2 | in | SRR5341252 | MDR-TB | lineage2.2.1.2 | in | ERR4799343 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR13266829 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4800305 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR13261072 | MDR-TB | lineage2.2.1.2 | None | SRR28351614 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4796881 | MDR-TB | lineage2.2.1.2 | in | SRR25827762 | Pre-XDR-TB | lineage2.2.1.2;lineage3 | None | SRR25827480 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR25206975 | MDR-TB | lineage2.2.1 | None | ERR2514267 | MDR-TB | lineage2.2.1.2 | None | ERR4798468 | MDR-TB | lineage2.2.1.2 | in | SRR15014683 | MDR-TB | lineage2.2.1 | None | ERR2514123 | MDR-TB | lineage2.2.1.2 | gb | SRR25827524 | Pre-XDR-TB | lineage2.2.1.1;lineage4 | None | SRR25515866 | Other | lineage2.2.1 | None | SRR22424877 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4800628 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR2512596 | MDR-TB | lineage2.2.1.2 | gb | ERR4798430 | MDR-TB | lineage2.2.1.2 | in | ERR2516906 | MDR-TB | lineage2.2.1.2 | gb | ERR13266957 | Pre-XDR-TB | lineage2.2.1.2 | None |
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