lineage | Count |
---|---|
lineage4.3.3 | 8 |
lineage4.3.4.2.1 | 5 |
lineage4.8 | 4 |
lineage2.2.1 | 8 |
lineage4.2.2.1 | 2 |
lineage4.3.4.1 | 2 |
lineage4.1.1.3 | 1 |
lineage4.4.1.2 | 1 |
lineage1.1.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.9.1 | 1 |
La1.4 | 1 |
lineage3 | 1 |
lineage4.3.1 | 2 |
spoligotype | Count |
---|---|
None | 39 |
ID | Drug resistance | Lineage | Country iso2 | ERR11591441 | Sensitive | lineage4.3.3 | None | SRR19276636 | Sensitive | lineage4.3.3 | None | ERR5918100 | HR-TB | lineage4.3.4.2.1 | za | ERR6865339 | HR-TB | lineage4.8 | None | SRR15316310 | Sensitive | lineage2.2.1 | None | SRR16149130 | MDR-TB | lineage4.2.2.1 | None | SRR16149153 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR18911241 | Sensitive | lineage4.3.4.1 | None | ERR6865643 | Other | lineage4.3.3 | None | SRR13423584 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213696 | Sensitive | lineage4.3.4.2.1 | None | ERR4815913 | Other | lineage4.3.4.2.1 | None | SRR26112730 | Sensitive | lineage2.2.1 | None | SRR21713561 | Other | lineage4.1.1.3 | None | ERR11082884 | Sensitive | lineage4.4.1.2 | None | SRR25515656 | Other | lineage2.2.1 | None | SRR5709755 | XDR-TB | lineage1.1.1 | th | SRR2101016 | Sensitive | lineage4.3.4.2.1 | None | ERR7911374 | MDR-TB | lineage4.3.3 | pe | SRR4033458 | Other | lineage4.3.2.1 | None | ERR2517001 | MDR-TB | lineage4.1.2.1 | gb | ERR4797672 | Pre-XDR-TB | lineage2.2.1 | in | ERR4812001 | Sensitive | lineage4.3.3 | pe | ERR2516695 | MDR-TB | lineage4.9.1 | nl | ERR2815596 | Other | La1.4 | None | ERR4830885 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798695 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798184 | Pre-XDR-TB | lineage3 | in | SRR6485048 | Sensitive | lineage4.8 | None | ERR4797696 | Pre-XDR-TB | lineage2.2.1 | in | ERR294214 | Sensitive | lineage4.3.4.2.1 | None | ERR4830732 | MDR-TB | lineage4.3.1 | dz | ERR4812186 | HR-TB | lineage4.8 | pe | ERR4024822 | Other | lineage4.3.3 | None | ERR4024825 | HR-TB | lineage4.8 | None | ERR4830722 | Pre-XDR-TB | lineage4.3.1 | dz | SRR8698482 | MDR-TB | lineage4.3.3 | None | SRR8698496 | MDR-TB | lineage4.3.3 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None |
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