Rv3919c - c.115delC

Drug resistance types
0 Sensitive 4 RR-TB 57 HR-TB 101 MDR-TB 38 Pre-XDR-TB 1 XDR-TB 146 Other
lineage Counts
lineage Count
lineage4.6.1 1
lineage1.2.2.2 14
lineage4.2.2.2 10
lineage3.1.2 9
lineage2.2.1 11
lineage3 68
lineage4.1.2.1 46
lineage2.2.1.1 7
lineage4.8 18
lineage1. 9
lineage5.1.4 4
lineage4.3.4.1 1
lineage1.2.2.1 3
lineage4.4.1.1 8
lineage1.1.2 18
lineage2.2.2 10
lineage4.1.1.3 13
lineage1.1.3.1 8
lineage4.1.2 3
lineage3.1.2.1 4
lineage4.6.1.2 3
lineage1.1.1.1 13
lineage3.1.1 5
lineage1.1.1 3
lineage4.5 9
lineage3.1 2
lineage4.4.1.2 1
lineage2.1 1
lineage4.9 5
lineage4 6
lineage4.1.1.2;lineage3 1
lineage4.4.2 3
lineage4.3.3 1
lineage4.2.2 4
lineage4.4 2
lineage4.1.2.1;lineage2.2.1 1
lineage4.2.1.1 1
lineage4.1.1.1 1
lineage1.2.1.2 1
lineage4.1 1
lineage4.6.1.1 1
lineage4.6.2.2 6
lineage4.7 1
lineage1.1.3.2 1
lineage4.1.3 1
lineage3.1.3 1
lineage4.1.4 2
lineage1.2.1.1 1
lineage1.1.3.3 1
lineage4.8;lineage1.1.1 1
spoligotype Counts
spoligotype Count
None 347
Geographic prevalence
Country level data for this variant is available for 295 isolates.
Statisctical support
Not enough data to calculate support.
ID Drug resistance Lineage Country iso2
ERR1199016 Other lineage4.6.1 ug
ERR4796557 MDR-TB lineage1.2.2.2 in
ERR3275205 Other lineage4.2.2.2 nl
ERR4819097 HR-TB lineage1.2.2.2 gb
ERR1034690 MDR-TB lineage3.1.2 in
SRR5067531 Other lineage2.2.1 vn
ERR4822010 Other lineage3 gb
SRR5818469 Other None
ERR4813269 Other lineage4.1.2.1 pe
ERR4797726 MDR-TB lineage3 in
ERR4831785 HR-TB lineage2.2.1.1 vn
ERR2510634 MDR-TB lineage3 None
ERR552419 Other lineage4.8 de
ERR2513535 Other lineage4.1.2.1 gb
ERR2513803 Other lineage3 gb
ERR1023302 MDR-TB lineage3 None
ERR4799105 Other lineage1.2.2.2 in
ERR3256230 Other lineage1. ph
SAMEA2535205 MDR-TB lineage4.8 uz
ERR552589 Other lineage5.1.4 None
ERR3275996 HR-TB lineage4.3.4.1 nl
ERR4798859 HR-TB lineage1.2.2.1 in
SRR7517678 MDR-TB lineage4.4.1.1 cd
ERR4816541 HR-TB lineage1.1.2 gb
ERR552562 Other lineage1.2.2.1 None
ERR779920 MDR-TB lineage4.1.2.1 pe
SRR5074122 HR-TB lineage2.2.2 vn
ERR4829537 Other lineage4.8 it
ERR2515872 Pre-XDR-TB lineage4.1.1.3 za
ERR4820568 Other lineage1.1.3.1 gb
ERR2510419 Pre-XDR-TB lineage4.2.2.2 pk
ERR4799708 MDR-TB lineage3 in
ERR4830743 Pre-XDR-TB lineage4.1.2 dz
ERR4797962 Pre-XDR-TB lineage4.1.1.3 in
ERR4830536 Other lineage4.1.1.3 None
ERR3275709 HR-TB lineage3 nl
ERR4796895 MDR-TB lineage3 in
ERR4797290 Other lineage4.1.2.1 in
ERR2446495 Other lineage3.1.2.1 nl
ERR751722 Other lineage1. th
SRR5073750 HR-TB lineage2.2.1.1 vn
ERR4813397 MDR-TB lineage4.1.2.1 pe
ERR2199948 Other lineage4.1.1.3 de
ERR1199111 MDR-TB lineage4.6.1.2 cd
ERR2513832 Other lineage3 gb
ERR3335730 HR-TB lineage1.2.2.2 pk
ERR718362 Other lineage1. th
ERR2512959 Other lineage1.1.3.1 gb
ERR4831728 HR-TB lineage1.1.1.1 vn
ERR7911285 MDR-TB lineage1.1.1.1 vn
ERR3275864 HR-TB lineage3 nl
ERR2517188 MDR-TB lineage3.1.1 nl
SRR2100170 HR-TB lineage1.1.3.1 None
SAMN02586016 MDR-TB lineage4.4.1.1 za
ERR038755 MDR-TB lineage4.1.1.3 ug
ERR2514512 Other lineage4.8 gb
SRR5067668 Other lineage1.1.1.1 vn
ERR4829144 Pre-XDR-TB lineage3 pk
ERR2512952 Other lineage4.4.1.1 gb
ERR4799058 MDR-TB lineage3.1.2 in
ERR4799836 Other lineage1.1.2 in
SRR7517769 MDR-TB lineage4.1.2.1 pe
ERR4813179 Pre-XDR-TB lineage4.1.2.1 pe
ERR1034933 Other lineage3 za
ERR767979 Other lineage1.1.1 th
SRR5073861 HR-TB lineage1.1.1.1 vn
ERR4812594 MDR-TB lineage4.1.2.1 pe
ERR2514216 Other lineage3 gb
SAMN02585966 Pre-XDR-TB lineage4.4.1.1 za
ERR751577 MDR-TB lineage4.1.2.1 pe
ERR775306 Other lineage4.1.2.1 pe
ERR1213854 HR-TB lineage4.5 kr
ERR4797739 Pre-XDR-TB lineage3.1 in
SRR5065464 Other lineage1.1.1.1 vn
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
ERR4798367 Other lineage4.8 in
SAMN02403511 MDR-TB lineage4.1.1.3 za
ERR2514950 Other lineage3 gb
ERR4811940 Other lineage4.4.1.2 pe
SRR7585420 Pre-XDR-TB lineage3 None
ERR502927 MDR-TB lineage2.2.1 None
ERR2517438 Other lineage3 nl
ERR4831627 MDR-TB lineage4.5 vn
ERR4828176 Other lineage2.2.1 vn
SRR5073602 Other lineage2.1 vn
ERR2514038 Other lineage3 gb
SAMN02584607 Other lineage2.2.1 md
SAMN02350423 Pre-XDR-TB lineage4.4.1.1 za
ERR4796331 HR-TB lineage4.9 in
ERR2510166 HR-TB lineage4 pe
DRR184655 MDR-TB lineage1.1.1.1 vn
ERR1034655 MDR-TB lineage4 bg
SRR2100892 HR-TB lineage3 None
ERR4815688 MDR-TB lineage1.1.2 gb
ERR2503490 Other lineage4.1.2.1 fi
ERR4829931 Pre-XDR-TB lineage4.1.1.2;lineage3 None
SRR6046288 Other lineage3 gb
SRR5073583 HR-TB lineage2.2.1.1 vn
ERR2513878 Other lineage4.2.2.2 gb
ERR4796710 HR-TB lineage3.1.2 in
ERR4815078 Other lineage3 gb
ERR2514522 Other lineage3 gb
ERR1213859 MDR-TB lineage2.2.2 kr
ERR2514935 HR-TB lineage3 gb
ERR4810984 MDR-TB lineage4.4.2 cn
ERR4819512 MDR-TB lineage1.1.2 gb
ERR3275207 Other lineage3.1.2.1 nl
SAMN02403510 Pre-XDR-TB lineage4.1.1.3 za
SAMN02053767 HR-TB lineage4.1.1.3 za
ERR751984 Other lineage1. th
ERR2510418 Pre-XDR-TB lineage3 pk
ERR4831411 Other lineage3 de
ERR5918046 XDR-TB lineage4.1.1.3 za
SRR5818673 Other lineage4.2.2.2 dj
ERR4796997 MDR-TB lineage3 in
ERR2516819 MDR-TB lineage1.2.2.2 gb
ERR552590 Other lineage5.1.4 cg
SRR5818411 MDR-TB None
SRR5073910 HR-TB lineage4.4.2 vn
ERR4830201 Other lineage2.2.2 vn
SRR6397955 Other lineage4.1.2.1 ca
ERR978669 Other lineage4.8 gl
SRR2100495 Other lineage3 None
ERR4815908 HR-TB lineage3 gb
ERR4831515 HR-TB lineage3 pk
ERR2707156 MDR-TB lineage4.3.3 cd
ERR552588 Other lineage5.1.4 None
ERR7911495 MDR-TB lineage2.2.2 vn
ERR4828741 Other lineage1.1.1 vn
SRR1723425 MDR-TB lineage2.2.2 cn
ERR4818255 HR-TB lineage3 None
ERR2510129 MDR-TB lineage4.1.2.1 pe
SRR5709841 MDR-TB lineage4.2.2 th
ERR3335746 Other lineage1.2.2.2 pk
SRR5067426 Other lineage2.2.1 vn
SRR2100403 Other lineage1.1.2 None
ERR4813359 MDR-TB lineage4.1.2.1 None
SRR5067242 HR-TB lineage1.1.1.1 vn
ERR2517109 Other lineage3 gb
ERR4818612 HR-TB lineage4.4 None
ERR1213882 Other lineage4.4.1.1 de
ERR2510163 HR-TB lineage4.1.2.1 pe
ERR4817022 HR-TB lineage1.1.2 gb
ERR4811313 MDR-TB lineage4.2.2 cn
ERR2677455 Pre-XDR-TB lineage4.1.2.1;lineage2.2.1 de
ERR2516698 Pre-XDR-TB lineage4.1.2.1 pe
ERR2446262 Other lineage4.2.2.2 nl
ERR4819109 Pre-XDR-TB lineage4 gb
SAMN02380989 MDR-TB lineage3.1.1 ug
ERR553308 Other lineage1.1.2 de
ERR2516677 Other lineage4.1.1.3 pe
ERR3275183 Other lineage1.1.2 nl
ERR2517513 Other lineage3.1.2.1 nl
ERR4829699 HR-TB lineage4.1.2.1 it
ERR4813285 MDR-TB lineage4.1.2.1 pe
ERR2513019 Other lineage3 gb
ERR067661 HR-TB lineage4.2.1.1 ru
ERR1034606 MDR-TB lineage1.1.2 pk
ERR4829392 Pre-XDR-TB lineage4.9 it
ERR4800541 HR-TB lineage4.5 in
ERR1034834 MDR-TB lineage4.1.2.1 pt
ERR4821631 Other lineage1.1.2 None
ERR2517147 Other lineage4.2.2.2 nl
ERR4796871 MDR-TB lineage3 in
ERR4817824 Other lineage1.1.3.1 gb
ERR4798565 MDR-TB lineage3.1.2 in
SRR8651597 Pre-XDR-TB lineage2.2.1 cn
ERR2516405 Pre-XDR-TB lineage4.1.2.1 pe
ERR2510317 MDR-TB lineage3 pk
ERR4829956 Pre-XDR-TB lineage4.1.2.1 None
SAMN02380991 Other lineage3 ug
SRR2099957 HR-TB lineage1.1.3.1 None
ERR1213848 Other lineage4 kr
ERR2513789 HR-TB lineage4.9 gb
SRR2100228 MDR-TB lineage3 None
ERR4828974 Pre-XDR-TB lineage4.9 it
ERR4830281 Other lineage4.1.1.1 vn
ERR552563 Other lineage1.2.2.1 None
ERR2514125 Other lineage3 None
SRR1166228 MDR-TB lineage4.8 ro
ERR4831891 HR-TB lineage2.2.1.1 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
ERR1465894 Other lineage4.8 ch
ERR752289 MDR-TB lineage1.1.1 th
ERR4817240 Other lineage1.2.1.2 gb
SAMN02599059 Other lineage1.2.2.2 in
ERR4828401 Other lineage1.1.1.1 vn
ERR2510556 MDR-TB lineage3 pk
ERR3287592 MDR-TB lineage4.8 None
SRR8380876 MDR-TB lineage1.1.2 in
ERR4831454 MDR-TB lineage1.1.2 None
ERR4813880 Other lineage4.8 None
SRR5065633 Other lineage1. vn
ERR1035227 Other lineage4.8 pt
ERR4819778 Other lineage4.8 None
ERR2514227 Other lineage3 None
ERR7911476 MDR-TB lineage2.2.2 vn
ERR751433 HR-TB lineage4 pe
ERR4800273 Other lineage3.1.2 in
ERR2512638 Other lineage3 gb
ERR2510400 Pre-XDR-TB lineage4.2.2.2 pk
SRR6045691 Other lineage1. gb
ERR2510635 MDR-TB lineage3 pk
ERR2516972 MDR-TB lineage4.2.2.2 gb
ERR4830138 HR-TB lineage4.8 None
ERR2677396 Pre-XDR-TB lineage4.1.2.1 de
ERR553226 MDR-TB lineage4.1 None
ERR2516597 Pre-XDR-TB lineage4.1.2.1 pe
ERR4797869 Pre-XDR-TB lineage1.2.2.2 in
ERR038738 RR-TB lineage4.6.1.1 ug
SAMN02414893 MDR-TB lineage3 se
ERR2513828 Other lineage1.1.2 gb
ERR751473 HR-TB lineage4.1.2.1 pe
ERR3275778 Other lineage3 nl
ERR4799653 MDR-TB lineage3 in
ERR4797274 HR-TB lineage4.4 in
ERR4798718 Other lineage3.1.2 in
ERR4829984 MDR-TB lineage4.6.2.2 None
ERR2516466 RR-TB lineage3.1.1 nl
ERR4812188 Other lineage4.7 pe
SRR2101373 MDR-TB lineage4.1.2.1 None
SRR5073772 HR-TB lineage2.2.1.1 vn
ERR2514305 Other lineage3 None
ERR2510352 MDR-TB lineage4.2.2.2 pk
SRR8380928 MDR-TB lineage1.1.2 in
ERR2510164 Other lineage4.1.2.1 pe
ERR2512627 Other lineage4.8 gb
ERR4796467 Other lineage3 in
ERR4809071 Pre-XDR-TB lineage4.1.1.3 za
ERR2510260 Pre-XDR-TB lineage3 pk
SRR5818642 MDR-TB lineage1.2.2.2 dj
ERR4815740 HR-TB lineage1.1.3.2 gb
ERR3287773 MDR-TB lineage4.1.2.1 pe
SRR1723424 HR-TB lineage2.2.2 cn
SRR5073857 Other lineage1.1.1.1 vn
ERR4832030 MDR-TB lineage4.5 vn
ERR1034983 Other lineage3 za
ERR2516361 MDR-TB lineage3.1.1 be
ERR2510787 Other lineage1.2.2.2 it
SRR6046179 HR-TB lineage4.1.3 None
ERR2516988 MDR-TB lineage3.1.2 gb
SRR6397720 Other lineage4.1.2.1 ca
SRR6397820 Other lineage4.1.2.1 ca
SRR6824480 MDR-TB lineage4.2.2 cn
ERR1199130 MDR-TB lineage4.6.1.2 None
ERR751422 MDR-TB lineage4.1.2.1 pe
ERR4799086 MDR-TB lineage3.1.2 in
ERR2503408 Other lineage4.6.2.2 fi
ERR751443 MDR-TB lineage4.1.2.1 pe
ERR4829989 Other lineage4.6.2.2 None
ERR2513196 Other lineage3 gb
ERR4799687 MDR-TB lineage3 in
ERR4831852 HR-TB lineage4.5 vn
SAMEA2533902 RR-TB lineage3.1.3 uz
ERR4818209 Other lineage4.1.2.1 gb
SAMN02053758 Pre-XDR-TB lineage4.4.1.1 za
ERR2510296 Pre-XDR-TB lineage3 pk
ERR4796676 HR-TB lineage3.1 in
SRR5065424 Other lineage2.2.1 vn
ERR4800014 HR-TB lineage3 in
ERR4796859 Other lineage4.1.2.1 in
ERR4831843 MDR-TB lineage2.2.1 vn
ERR4820696 Other lineage4.2.2.2 gb
ERR2516451 MDR-TB lineage4.1.2.1 pe
ERR4818421 Other lineage3 gb
SRR6325454 Other lineage4.1.2.1 us
ERR4815526 Other lineage4.8 gb
SRR5067468 Other lineage1.1.1.1 vn
SRR2100189 HR-TB lineage1.1.3.1 None
ERR4815173 Other lineage1.1.3.1 gb
SAMEA2534084 RR-TB lineage4.8 uz
ERR1035133 HR-TB lineage2.2.1.1 vn
ERR2516531 MDR-TB lineage4.1.2.1 pe
ERR234229 Other lineage4.5 cn
ERR2199753 Other lineage4.1.4 de
SRR6153169 Other lineage1. ca
ERR2503563 Other lineage4.1.1.3 fi
ERR7910892 MDR-TB lineage4.1.2.1 pe
ERR2510347 MDR-TB lineage3 pk
ERR4799897 MDR-TB lineage3 in
SRR5341388 Other lineage3 in
ERR1023384 Other lineage1.2.2.2 None
ERR2706948 MDR-TB lineage4.6.1.2 cd
SRR6152942 HR-TB lineage1. ca
ERR2510191 MDR-TB lineage4.1.2.1 pe
ERR779924 MDR-TB lineage4.1.2.1 pe
ERR4830196 Other lineage1.1.1.1 vn
ERR4828143 Other lineage2.2.1 vn
ERR4831628 MDR-TB lineage4.1.2 vn
ERR2446298 Other lineage1.1.2 nl
ERR4799204 Other lineage1.1.2 in
ERR4831945 HR-TB lineage4.5 None
SRR6824472 MDR-TB lineage2.2.2 cn
ERR4813499 HR-TB lineage4.1.2.1 pe
SRR5341420 MDR-TB lineage1.1.2 in
SRR5341284 HR-TB lineage4.5 in
ERR4799947 Other lineage3 in
ERR2515615 Pre-XDR-TB lineage4.1.1.3 za
ERR718269 MDR-TB lineage4.4.2 th
ERR4798194 MDR-TB lineage1.2.2.2 in
SRR2100800 Other lineage3 None
SRR5073612 HR-TB lineage2.2.1.1 vn
ERR2514401 Other lineage3 gb
ERR4828790 Pre-XDR-TB lineage4.1.2.1 None
ERR400381 Other lineage1.1.3.1 None
ERR2041727 MDR-TB lineage4.4.1.1 rs
ERR4814286 HR-TB lineage1.2.1.1 gb
SRR6046756 Other lineage1. gb
ERR751632 MDR-TB lineage4.1.2.1 pe
SRR2100814 Other lineage4.1.2.1 None
ERR4815121 HR-TB lineage4.6.2.2 None
SAMN02414967 MDR-TB lineage2.2.1 se
ERR2510642 Pre-XDR-TB lineage3 pk
ERR4796958 Other lineage1.1.3.3 in
SAMN02599057 Other lineage1.2.2.2 in
ERR400478 Other lineage3 gb
SRR5073706 Other lineage1.1.1.1 vn
SAMN02414976 MDR-TB lineage3.1.1 se
SRR5073947 HR-TB lineage4.5 vn
ERR4818200 Other lineage3.1.2 gb
ERR4799263 Pre-XDR-TB lineage4.1.2.1 in
ERR2513485 Other lineage3 None
ERR4828815 Pre-XDR-TB lineage4.1.2 None
ERR2510447 MDR-TB lineage3 pk
ERR4796876 MDR-TB lineage3.1.2.1 in
ERR2516434 MDR-TB lineage4.1.4 pe
SAMN02053786 Other lineage4.1.2.1 za
ERR040141 MDR-TB lineage3 ug
ERR038280 Other lineage3 gb
SRR671771 MDR-TB lineage2.2.1 cn
ERR4822368 MDR-TB lineage4.9 None
ERR751518 MDR-TB lineage4.1.2.1 pe
ERR2514896 Other lineage3 gb
ERR4828844 Pre-XDR-TB lineage4 None
ERR2446479 Other lineage3 nl
ERR275236 Other lineage4.8 pt
ERR702415 Other lineage5.1.4 gh
ERR1035091 Other lineage4.8;lineage1.1.1 vn
ERR4800007 Other lineage1.2.2.2 in
ERR3275210 Other lineage3 nl
ERR2517330 Other lineage1.1.2 nl
SRR5074083 HR-TB lineage1.1.1.1 vn
ERR2677391 MDR-TB lineage4.6.2.2 de
ERR2516448 MDR-TB lineage4.6.2.2 nl
ERR4797982 Other lineage3 in
ERR4810979 Pre-XDR-TB lineage4.2.2 cn
ERR228065 Other lineage4.8 ru