Rv3919c - c.180delA
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
5 HR-TB
112 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.1 | 122 |
| lineage4.3.3;lineage4.3.4.1 | 3 |
| lineage2.2.1.1;lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 126 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10808574 | MDR-TB | lineage4.3.4.1 | None | ERR13261622 | MDR-TB | lineage4.3.4.1 | None | ERR13261665 | MDR-TB | lineage4.3.4.1 | None | SRR19276595 | MDR-TB | lineage4.3.4.1 | None | ERR12117960 | MDR-TB | lineage4.3.4.1 | None | ERR13261614 | MDR-TB | lineage4.3.4.1 | None | ERR12117969 | MDR-TB | lineage4.3.4.1 | None | ERR6879025 | MDR-TB | lineage4.3.4.1 | None | ERR13260399 | MDR-TB | lineage4.3.4.1 | None | ERR13260411 | MDR-TB | lineage4.3.4.1 | None | ERR12117985 | MDR-TB | lineage4.3.4.1 | None | ERR2184440 | MDR-TB | lineage4.3.4.1 | pe | ERR3287561 | MDR-TB | lineage4.3.4.1 | None | ERR3287560 | MDR-TB | lineage4.3.4.1 | None | SRR28393933 | MDR-TB | lineage4.3.4.1 | None | SRR16370495 | MDR-TB | lineage4.3.4.1 | None | SRR28393475 | MDR-TB | lineage4.3.4.1 | None | ERR3287367 | MDR-TB | lineage4.3.4.1 | pe | ERR4812518 | MDR-TB | lineage4.3.4.1 | pe | SRR28394265 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR3287537 | MDR-TB | lineage4.3.4.1 | None | SRR28393814 | MDR-TB | lineage4.3.4.1 | None | SRR28393484 | MDR-TB | lineage4.3.4.1 | None | ERR4811880 | Pre-XDR-TB | lineage4.3.4.1 | pe | SRR28393436 | MDR-TB | lineage4.3.4.1 | None | ERR4812358 | MDR-TB | lineage4.3.4.1 | pe | ERR751456 | MDR-TB | lineage4.3.4.1 | pe | ERR4812270 | MDR-TB | lineage4.3.4.1 | None | ERR845935 | MDR-TB | lineage4.3.4.1 | pe | ERR751382 | MDR-TB | lineage4.3.4.1 | pe | ERR751541 | MDR-TB | lineage4.3.4.1 | pe | ERR779874 | MDR-TB | lineage4.3.4.1 | pe | ERR6866771 | MDR-TB | lineage4.3.4.1 | None | ERR6879024 | MDR-TB | lineage4.3.4.1 | None | ERR4813738 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR6879035 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | None | SRR28394006 | MDR-TB | lineage4.3.4.1 | None | SRR28393252 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | None | SRR28393328 | MDR-TB | lineage4.3.4.1 | None | ERR4811725 | MDR-TB | lineage4.3.4.1 | pe | ERR13261607 | MDR-TB | lineage4.3.4.1 | None | ERR6865404 | MDR-TB | lineage4.3.4.1 | None | SRR7517786 | MDR-TB | lineage4.3.4.1 | None | ERR6866468 | MDR-TB | lineage4.3.4.1 | None | SRR28394234 | MDR-TB | lineage4.3.4.1 | None | SRR28393422 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR13260530 | MDR-TB | lineage4.3.4.1 | None | ERR2184442 | MDR-TB | lineage4.3.4.1 | pe | ERR12118036 | MDR-TB | lineage4.3.4.1 | None | SRR10808572 | MDR-TB | lineage4.3.4.1 | None | ERR13261883 | MDR-TB | lineage4.3.4.1 | None | ERR3287792 | MDR-TB | lineage4.3.4.1 | pe | ERR4812105 | HR-TB | lineage2.2.1.1;lineage4.3.4.1 | None | SRR28394215 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR22461676 | MDR-TB | lineage4.3.4.1 | None | ERR779848 | MDR-TB | lineage4.3.4.1 | pe | SRR28393935 | MDR-TB | lineage4.3.4.1 | None | ERR4813473 | MDR-TB | lineage4.3.4.1 | pe | SRR28393377 | MDR-TB | lineage4.3.4.1 | None | ERR4813460 | MDR-TB | lineage4.3.4.1 | pe | ERR775329 | MDR-TB | lineage4.3.4.1 | pe | ERR4812853 | MDR-TB | lineage4.3.4.1 | None | ERR751626 | MDR-TB | lineage4.3.4.1 | pe | ERR4812893 | MDR-TB | lineage4.3.4.1 | pe | ERR779878 | MDR-TB | lineage4.3.4.1 | pe | ERR2516679 | MDR-TB | lineage4.3.4.1 | nl | ERR2516500 | MDR-TB | lineage4.3.4.1 | pe | ERR2516699 | Pre-XDR-TB | lineage4.3.4.1 | pe | ERR2516493 | MDR-TB | lineage4.3.4.1 | pe | ERR2516636 | MDR-TB | lineage4.3.4.1 | pe | ERR2510138 | MDR-TB | lineage4.3.4.1 | pe | ERR2510154 | MDR-TB | lineage4.3.4.1 | pe | ERR2510218 | MDR-TB | lineage4.3.4.1 | pe | ERR2510215 | MDR-TB | lineage4.3.4.1 | pe | ERR11082277 | MDR-TB | lineage4.3.4.1 | None | ERR4178251 | MDR-TB | lineage4.3.4.1 | None | ERR6866188 | HR-TB | lineage4.3.4.1 | None | ERR6866294 | MDR-TB | lineage4.3.4.1 | None | ERR6866442 | MDR-TB | lineage4.3.4.1 | None | ERR4813719 | MDR-TB | lineage4.3.4.1 | None | ERR12117904 | MDR-TB | lineage4.3.4.1 | None | SRR16915753 | MDR-TB | lineage4.3.4.1 | None | ERR6866457 | HR-TB | lineage4.3.4.1 | None | ERR4813633 | MDR-TB | lineage4.3.4.1 | None | ERR12118058 | MDR-TB | lineage4.3.4.1 | None | SRR22461651 | MDR-TB | lineage4.3.4.1 | None | ERR4813706 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR12117898 | MDR-TB | lineage4.3.4.1 | None | SRR28393375 | MDR-TB | lineage4.3.4.1 | None | ERR6866260 | MDR-TB | lineage4.3.4.1 | None | ERR11082278 | MDR-TB | lineage4.3.4.1 | None | ERR1034757 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | pe | ERR12118029 | MDR-TB | lineage4.3.4.1 | None | ERR2516647 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4813178 | Pre-XDR-TB | lineage4.3.4.1 | pe | ERR4813409 | MDR-TB | lineage4.3.4.1 | pe | ERR2184566 | MDR-TB | lineage4.3.4.1 | pe | ERR3287576 | HR-TB | lineage4.3.4.1 | None | ERR3287700 | MDR-TB | lineage4.3.4.1 | pe | ERR3287707 | MDR-TB | lineage4.3.4.1 | pe | ERR3287738 | MDR-TB | lineage4.3.4.1 | pe | ERR3287754 | MDR-TB | lineage4.3.4.1 | pe | SRR28393733 | MDR-TB | lineage4.3.4.1 | None | ERR3287545 | MDR-TB | lineage4.3.4.1 | None | ERR3287717 | MDR-TB | lineage4.3.4.1 | pe | ERR3287311 | MDR-TB | lineage4.3.4.1 | pe | SRR28393505 | MDR-TB | lineage4.3.4.1 | None | ERR7910865 | MDR-TB | lineage4.3.4.1 | pe | ERR7910888 | MDR-TB | lineage4.3.4.1 | pe | ERR4812289 | MDR-TB | lineage4.3.4.1 | None | ERR4812989 | MDR-TB | lineage4.3.4.1 | pe | ERR4813027 | MDR-TB | lineage4.3.4.1 | None | SRR3732579 | MDR-TB | lineage4.3.4.1 | None | ERR12118039 | MDR-TB | lineage4.3.4.1 | None | ERR1034726 | MDR-TB | lineage4.3.4.1 | pe | ERR1034725 | MDR-TB | lineage4.3.4.1 | pe | ERR1034752 | HR-TB | lineage4.3.4.1 | pe | ERR4813729 | MDR-TB | lineage4.3.4.1 | None | SRR28394251 | MDR-TB | lineage4.3.4.1 | None | SRR16370468 | MDR-TB | lineage4.3.4.1 | None | SRR28394036 | MDR-TB | lineage4.3.4.1 | None | SRR10808944 | MDR-TB | lineage4.3.4.1 | None | SRR28393747 | MDR-TB | lineage4.3.4.1 | None | ERR13260553 | MDR-TB | lineage4.3.4.1 | None | ERR13261604 | MDR-TB | lineage4.3.4.1 | None | ERR13260434 | MDR-TB | lineage4.3.4.1 | None |
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