Rv3919c - c.319dupG
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
10 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
124 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 130 |
| lineage2.2.1;lineage4.3.3 | 2 |
| lineage4.1.2.1;lineage4.3.3 | 2 |
| lineage4.1.2;lineage4.3.3 | 1 |
| lineage4.8 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 137 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6865437 | Other | lineage4.3.3 | None | ERR6865770 | Other | lineage4.3.3 | None | ERR6865902 | Other | lineage4.3.3 | None | ERR4813501 | Other | lineage4.3.3 | None | SRR29124302 | Other | lineage4.3.3 | None | SRR28394075 | Other | lineage4.3.3 | None | SRR8698506 | Other | lineage4.3.3 | None | ERR6866066 | Other | lineage4.3.3 | None | ERR6866763 | Other | lineage4.3.3 | None | ERR4024923 | Other | lineage4.3.3 | None | ERR6865922 | Other | lineage4.3.3 | None | ERR6865713 | Other | lineage4.3.3 | None | ERR4024906 | Other | lineage4.3.3 | None | ERR4024565 | Other | lineage4.3.3 | None | ERR4024611 | Other | lineage4.3.3 | None | SRR8698495 | Other | lineage4.3.3 | None | ERR4811734 | Other | lineage4.3.3 | pe | ERR4811762 | Other | lineage4.3.3 | pe | ERR4812212 | Other | lineage2.2.1;lineage4.3.3 | pe | ERR2184546 | Other | lineage4.3.3 | pe | ERR2184221 | Other | lineage4.3.3 | pe | ERR6865792 | Other | lineage4.3.3 | None | ERR3287630 | MDR-TB | lineage4.3.3 | pe | ERR4812390 | Other | lineage4.3.3 | pe | ERR4812403 | Other | lineage4.3.3 | pe | ERR4812616 | Other | lineage4.3.3 | pe | ERR775336 | Other | lineage4.3.3 | pe | ERR4829818 | Other | lineage4.3.3 | it | ERR775294 | Other | lineage4.3.3 | pe | ERR751449 | Other | lineage4.3.3 | pe | ERR4813700 | MDR-TB | lineage4.1.2.1;lineage4.3.3 | None | ERR6866559 | Other | lineage4.3.3 | None | ERR4024655 | Other | lineage4.3.3 | None | ERR4025034 | Other | lineage4.3.3 | None | SRR28858435 | Other | lineage4.3.3 | None | SRR10808526 | Other | lineage4.3.3 | None | ERR6865439 | Other | lineage4.3.3 | None | SRR10808456 | Other | lineage4.3.3 | None | ERR4024821 | Other | lineage4.3.3 | None | SRR26112683 | Other | lineage4.3.3 | None | ERR6865536 | Other | lineage4.3.3 | None | ERR6865819 | Other | lineage4.3.3 | None | ERR6866000 | Other | lineage4.3.3 | None | ERR6866020 | Other | lineage4.3.3 | None | SRR10808622 | Other | lineage4.3.3 | None | ERR4024882 | Other | lineage4.3.3 | None | ERR4178172 | Other | lineage4.3.3 | None | ERR6865722 | Other | lineage4.3.3 | None | ERR6865925 | Other | lineage4.3.3 | None | ERR4025047 | Other | lineage4.3.3 | None | ERR4178159 | Other | lineage4.3.3 | None | ERR4024897 | Other | lineage4.3.3 | None | ERR2184231 | Other | lineage4.1.2;lineage4.3.3 | pe | ERR4178212 | Other | lineage4.3.3 | None | SRR8698504 | Other | lineage4.3.3 | None | SRR8698494 | Other | lineage4.3.3 | None | SRR29772828 | MDR-TB | lineage4.3.3 | None | SRR29055931 | MDR-TB | lineage4.8 | None | ERR6866612 | Other | lineage4.3.3 | None | ERR6866648 | Other | lineage4.3.3 | None | ERR3287310 | Other | lineage4.3.3 | pe | ERR4812292 | Other | lineage4.3.3 | None | ERR4812378 | Other | lineage4.3.3 | pe | ERR3287629 | MDR-TB | lineage4.3.3 | pe | SRR6785276 | MDR-TB | lineage4.7 | None | ERR4024569 | Other | lineage4.3.3 | None | ERR4024994 | Other | lineage4.3.3 | None | ERR4812376 | Other | lineage4.3.3 | pe | SRR8698483 | Other | lineage4.3.3 | None | ERR2184396 | Other | lineage4.3.3 | pe | ERR6865480 | Other | lineage4.3.3 | None | SRR10808415 | Other | lineage4.1.2.1;lineage4.3.3 | None | ERR6865435 | Other | lineage4.3.3 | None | SRR28858499 | Other | lineage4.3.3 | None | ERR6866004 | Other | lineage4.3.3 | None | ERR4024647 | Other | lineage4.3.3 | None | ERR6866126 | MDR-TB | lineage4.3.3 | None | ERR6865964 | Other | lineage4.3.3 | None | SRR10808817 | Other | lineage4.3.3 | None | ERR2184681 | Other | lineage4.3.3 | None | ERR6865963 | Other | lineage4.3.3 | None | ERR4024633 | Other | lineage4.3.3 | None | ERR4024798 | Other | lineage4.3.3 | None | ERR4024909 | Other | lineage4.3.3 | None | SRR8698503 | Other | lineage4.3.3 | None | ERR4025005 | Other | lineage4.3.3 | None | ERR6865835 | Other | lineage4.3.3 | None | ERR6866238 | Other | lineage4.3.3 | None | ERR6865316 | Other | lineage4.3.3 | None | ERR4178118 | Other | lineage4.3.3 | None | ERR6865337 | Other | lineage4.3.3 | None | ERR13267462 | Other | lineage4.3.3 | None | ERR6866053 | Other | lineage4.3.3 | None | SRR28859613 | Other | lineage4.3.3 | None | SRR28858656 | Other | lineage4.3.3 | None | ERR6866077 | Other | lineage4.3.3 | None | SRR8698481 | Other | lineage4.3.3 | None | ERR4024768 | Other | lineage4.3.3 | None | SRR28859604 | Other | lineage4.3.3 | None | SRR8698507 | Other | lineage4.3.3 | None | ERR4025091 | Other | lineage4.3.3 | None | ERR6865615 | Other | lineage4.3.3 | None | ERR6866440 | Other | lineage4.3.3 | None | ERR13260698 | MDR-TB | lineage4.3.3 | None | SRR10808426 | Other | lineage4.3.3 | None | ERR4812302 | Other | lineage4.3.3 | pe | SRR26112735 | Other | lineage4.3.3 | None | SRR26112240 | Other | lineage4.3.3 | None | ERR4811707 | Other | lineage4.3.3 | pe | ERR4811976 | Other | lineage4.3.3 | pe | ERR4811986 | Other | lineage2.2.1;lineage4.3.3 | pe | ERR4812183 | Other | lineage4.3.3 | pe | ERR4812326 | Other | lineage4.3.3 | pe | ERR4831193 | Other | lineage4.3.3 | de | ERR4024934 | Other | lineage4.3.3 | None | ERR3287467 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4811916 | Other | lineage4.3.3 | pe | ERR3287365 | Other | lineage4.3.3 | pe | ERR4812531 | Other | lineage4.3.3 | pe | ERR4812863 | Other | lineage4.3.3 | pe | ERR4812935 | Other | lineage4.3.3 | pe | ERR775310 | MDR-TB | lineage4.3.3 | pe | ERR4812052 | Other | lineage4.3.3 | pe | ERR751591 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4813224 | Other | lineage4.3.3 | pe | ERR2510150 | MDR-TB | lineage4.3.3 | pe | ERR2184484 | Other | lineage4.3.3 | pe | ERR4813264 | Other | lineage4.3.3 | None | ERR6866839 | Other | lineage4.3.3 | None | ERR13261875 | HR-TB | lineage4.3.3 | None | SRR8698491 | Other | lineage4.3.3 | None | ERR6865564 | Other | lineage4.3.3 | None | ERR6866383 | Other | lineage4.3.3 | None | ERR6865866 | Other | lineage4.3.3 | None | ERR4024666 | Other | lineage4.3.3 | None | ERR4024574 | Other | lineage4.3.3 | None | ERR4178296 | Other | lineage4.3.3 | None |
|---|
