Rv3919c - c.355_356delGC
Drug resistance types
0 Sensitive
3 RR-TB
11 HR-TB
17 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 14 |
| lineage3 | 14 |
| lineage4.6.2 | 10 |
| 6 | |
| lineage4.2.2.1 | 6 |
| lineage1.1.2 | 6 |
| lineage4.7 | 3 |
| lineage3.1.2.1 | 1 |
| lineage1.1.1.1 | 2 |
| lineage4.8 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage1.2.1.1 | 2 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 70 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21798474 | HR-TB | lineage4.1.2.1 | None | ERR4817477 | Other | lineage3 | gb | ERR9117742 | Other | lineage4.6.2 | None | ERR4553629 | MDR-TB | None | SRR29096315 | MDR-TB | lineage4.1.2.1 | None | ERR6362089 | MDR-TB | lineage4.1.2.1 | None | ERR13289470 | Other | lineage4.1.2.1 | None | SRR29274233 | MDR-TB | lineage4.2.2.1 | None | ERR4553545 | MDR-TB | None | ERR13290085 | Other | lineage4.6.2 | None | SRR29017179 | Pre-XDR-TB | lineage3 | None | SRR29772791 | Pre-XDR-TB | lineage3 | None | ERR13289469 | Other | lineage4.1.2.1 | None | SRR6964498 | Other | lineage3 | None | SAMN02598975 | HR-TB | lineage1.1.2 | in | SRR1172139 | HR-TB | lineage1.1.2 | None | SRR29231561 | Other | lineage4.7 | None | ERR553380 | Other | lineage4.7 | cg | ERR4553480 | MDR-TB | None | ERR4553634 | MDR-TB | None | SRR16149120 | MDR-TB | lineage4.2.2.1 | None | SRR29017549 | Pre-XDR-TB | lineage3 | None | ERR9117761 | Other | lineage4.6.2 | None | ERR4820564 | Other | lineage4.6.2 | None | SRR21798488 | HR-TB | lineage4.1.2.1 | None | SRR6046550 | Other | lineage4.6.2 | gb | SRR6797358 | Other | lineage3.1.2.1 | None | SRR13180238 | HR-TB | lineage4.1.2.1 | None | SRR16149170 | MDR-TB | lineage4.2.2.1 | None | SAMEA2533704 | MDR-TB | lineage4.1.2.1 | uz | SRR5073552 | Other | lineage1.1.1.1 | vn | SRR29464863 | Other | lineage4.8 | None | SRR22424865 | Other | lineage3 | None | ERR13290214 | Other | lineage4.6.2 | None | ERR551105 | RR-TB | lineage4.1.2.1 | None | ERR4553678 | MDR-TB | None | SRR1180274 | HR-TB | lineage1.1.2 | None | ERR4827453 | Other | lineage4.1.2.1 | None | SRR29017245 | Pre-XDR-TB | lineage3 | None | SRR21798507 | HR-TB | lineage4.1.2.1 | None | ERR551104 | RR-TB | lineage4.1.2.1 | None | SRR22048499 | HR-TB | lineage1.2.1.2.1 | None | SRR8380938 | MDR-TB | lineage1.1.2 | in | SRR22251148 | Other | lineage3.1.2 | None | SRR21690302 | Other | lineage1.2.1.1 | None | SRR28240035 | Other | lineage4.8 | None | SRR6045552 | Other | lineage4.6.2 | gb | SRR4423167 | Pre-XDR-TB | lineage3 | None | SRR1180457 | HR-TB | lineage1.1.2 | None | ERR6359030 | MDR-TB | lineage4.3.4.2.1 | None | SRR29289384 | RR-TB | lineage3 | None | SRR16149136 | MDR-TB | lineage4.2.2.1 | None | SRR29017197 | Pre-XDR-TB | lineage3 | None | ERR13266512 | Other | lineage3 | None | ERR13285359 | Other | lineage1.2.1.1 | None | SRR1169570 | HR-TB | lineage1.1.2 | None | SRR7069303 | Other | lineage4.6.2 | None | SRR29464866 | Other | lineage4.8 | None | ERR2706955 | Other | lineage4.7 | cd | ERR13261512 | Other | lineage3 | None | SRR16149113 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR29017229 | Pre-XDR-TB | lineage3 | None | SRR21798473 | HR-TB | lineage4.1.2.1 | None | ERR551104_ERR551105 | MDR-TB | lineage4.1.2.1 | None | SRR29274251 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR28044713 | MDR-TB | lineage3 | None | ERR4819173 | Other | lineage4.6.2 | gb | ERR2514049 | Other | lineage4.6.2 | gb | SRR8217879 | Other | lineage1.1.1.1 | None | ERR4553689 | MDR-TB | None |
|---|
