Rv3919c - p.Ala138Val
Drug resistance types
77 Sensitive
5 RR-TB
37 HR-TB
94 MDR-TB
59 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.2 | 4 |
| lineage3 | 54 |
| lineage4.1.1.3 | 9 |
| lineage4.5 | 4 |
| lineage4.2.2.2 | 3 |
| lineage1.2.1.2 | 6 |
| lineage4.1.2 | 2 |
| lineage4.1.2.1 | 49 |
| lineage1.1.2 | 18 |
| lineage4.8 | 11 |
| lineage2.2.1.1 | 2 |
| lineage2.2.2 | 6 |
| lineage4.1 | 9 |
| lineage2.2.1 | 6 |
| lineage4.1.4 | 18 |
| lineage4.1.1.1 | 5 |
| lineage1.2.2.2 | 2 |
| lineage1.2.1.1 | 3 |
| lineage4 | 2 |
| lineage1.1.3.1 | 3 |
| lineage1.1.1.1 | 2 |
| lineage4.2.2 | 2 |
| lineage3.1.2 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.1.1 | 18 |
| lineage4.6.2.2 | 1 |
| lineage4.8;lineage4.5 | 1 |
| lineage4.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4.6.1.2 | 5 |
| lineage4.3.3 | 2 |
| lineage4.1;lineage1.1.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage5.1.1;lineage4.8 | 2 |
| lineage6.1.3 | 1 |
| 5 | |
| lineage3;lineage2.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.9;lineage3 | 1 |
| lineage4.6.2.1;lineage3 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.3.2 | 1 |
| lineage2.1 | 1 |
| lineage1.1.1 | 2 |
| lineage4.3.3;lineage4.1.2.1 | 1 |
| La1.7.1 | 2 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 284 |
Geographic prevalence
Country level data for this variant is available for 90 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21277283 | Pre-XDR-TB | lineage4.4.2 | None | SRR21674628 | MDR-TB | lineage3 | None | ERR11050887 | HR-TB | lineage4.1.1.3 | None | SRR21576543 | MDR-TB | lineage4.5 | None | SRR21576694 | MDR-TB | lineage4.5 | None | ERR11081332 | HR-TB | lineage4.2.2.2 | None | SRR21675694 | Sensitive | lineage1.2.1.2 | None | SRR22248471 | HR-TB | lineage4.1.2 | None | ERR11068507 | Sensitive | lineage4.1.2.1 | None | ERR11080937 | MDR-TB | lineage3 | None | SRR22175237 | MDR-TB | lineage1.1.2 | None | ERR11068194 | HR-TB | lineage4.1.2.1 | None | ERR11068643 | HR-TB | lineage4.1.2.1 | None | ERR11080892 | MDR-TB | lineage3 | None | ERR11080929 | MDR-TB | lineage4.8 | None | ERR11082563 | Sensitive | lineage4.1.2.1 | None | ERR11081823 | MDR-TB | lineage3 | None | ERR11082249 | Sensitive | lineage4.1.2.1 | None | SRR6207286 | Sensitive | lineage2.2.1.1 | None | ERR11083087 | MDR-TB | lineage3 | None | SRR21887758 | MDR-TB | lineage2.2.2 | None | ERR552117 | Sensitive | lineage4.1 | None | ERR552116 | Sensitive | lineage4.1 | None | SRR3085264 | MDR-TB | lineage2.2.1 | None | SAMEA2534424 | Sensitive | lineage4.1 | None | SRR3082072 | MDR-TB | lineage1.1.2 | None | SAMN02414948 | MDR-TB | lineage4.1.4 | se | ERR2199858 | Sensitive | lineage4.1.2 | de | ERR4814468 | Other | lineage1.1.2 | gb | SRR3085330 | MDR-TB | lineage1.1.2 | None | SAMN02585974 | Pre-XDR-TB | lineage4.1.1.1 | za | ERR4814671 | Other | lineage3 | gb | SAMN02053762 | MDR-TB | lineage4.1.1.1 | None | ERR4814472 | Other | lineage4.1 | None | SAMN02599057 | Other | lineage1.2.2.2 | in | ERR551998 | Sensitive | lineage4.1.1.3 | None | ERR4815502 | Other | lineage4.1 | None | SAMN02414871 | MDR-TB | lineage4.1.4 | se | ERR4815839 | Sensitive | lineage3 | None | ERR3275171 | Sensitive | lineage1.2.1.1 | nl | SAMN02350487 | Pre-XDR-TB | lineage4.1.1.1 | za | ERR3275329 | HR-TB | lineage3 | nl | ERR2184218 | Sensitive | lineage4.1.2.1 | pe | SRR3732653 | Sensitive | lineage4 | None | ERR2184533 | Sensitive | lineage4.1.2.1 | pe | ERR4816639 | Other | lineage1.1.2 | None | ERR2510499 | Pre-XDR-TB | lineage3 | None | SAMN02414870 | MDR-TB | lineage3 | se | ERR2510607 | Pre-XDR-TB | lineage3 | None | ERR2510385 | Pre-XDR-TB | lineage3 | pk | ERR2510606 | Pre-XDR-TB | lineage3 | pk | ERR230065 | Sensitive | lineage1.1.3.1 | None | ERR234203 | HR-TB | lineage4.1.1.3 | gh | SAMN02398708 | Pre-XDR-TB | lineage2.2.2 | kr | ERR234241 | Sensitive | lineage1.1.1.1 | vn | ERR234663 | Sensitive | lineage2.2.1 | ru | SAMN02585971 | Pre-XDR-TB | lineage4.1.1.1 | za | ERR3148159 | MDR-TB | lineage4.1.1.3 | mx | ERR2512824 | HR-TB | lineage3 | gb | SRR5065492 | HR-TB | lineage4.8 | vn | ERR2513009 | HR-TB | lineage3 | gb | ERR2513099 | HR-TB | lineage3 | gb | ERR2510142 | HR-TB | lineage4.1.2.1 | pe | ERR2510363 | MDR-TB | lineage3 | pk | SAMN02585968 | Pre-XDR-TB | lineage4.1.1.1 | za | ERR2510432 | Pre-XDR-TB | lineage4.1.2.1 | pk | ERR4818635 | Other | lineage1.1.2 | gb | ERR2516884 | MDR-TB | lineage4.2.2 | gb | ERR2510420 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2516386 | Sensitive | lineage4.1.2.1 | be | ERR2516913 | MDR-TB | lineage4.1.4 | gb | SRR5341440 | Sensitive | lineage3.1.2 | in | ERR2516440 | RR-TB | lineage4.1.2.1 | pe | ERR2516932 | MDR-TB | lineage4.1.4 | gb | ERR2516942 | MDR-TB | lineage4.1.4 | gb | ERR2517297 | Sensitive | lineage1.2.1.1 | nl | ERR2516924 | MDR-TB | lineage4.2.2 | gb | ERR2517057 | MDR-TB | lineage4.1.4 | gb | ERR2514570 | Sensitive | lineage3 | gb | ERR2517042 | MDR-TB | lineage4.1.4 | gb | ERR2516839 | Pre-XDR-TB | lineage3 | gb | ERR4819878 | Other | lineage1.1.2 | None | ERR2516050 | HR-TB | lineage3 | za | ERR2516766 | MDR-TB | lineage4.1.4 | gb | ERR2517113 | MDR-TB | lineage1.1.2 | gb | ERR4819909 | Sensitive | lineage4.1.2.1 | gb | ERR2517080 | MDR-TB | lineage4.1.4 | gb | ERR2446572 | Sensitive | lineage1.2.1.1 | nl | ERR2516807 | MDR-TB | lineage4.1.4 | gb | ERR2515130 | MDR-TB | lineage4.3.2.1 | za | ERR2516871 | Pre-XDR-TB | lineage3 | gb | ERR2515261 | HR-TB | lineage3 | za | ERR2517351 | Sensitive | lineage3 | nl | SRR5486895 | MDR-TB | lineage4.1.2.1 | None | SRR5486884 | MDR-TB | lineage4.1.2.1 | None | ERR2707214 | MDR-TB | lineage4.1.1 | cd | SRR5486866 | MDR-TB | lineage4.1.2.1 | None | ERR266523 | Sensitive | lineage1.1.2 | None | ERR266528 | Sensitive | lineage4.1.2.1 | None | SRR5818570 | MDR-TB | lineage1.1.2 | dj | ERR4822363 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829177 | RR-TB | lineage4.6.2.2 | ng | SRR5894884 | Pre-XDR-TB | lineage2.2.2 | None | ERR4829073 | HR-TB | lineage4.1.2.1 | it | ERR2446303 | HR-TB | lineage3 | nl | ERR4829952 | Pre-XDR-TB | lineage3 | pk | SRR6152899 | MDR-TB | lineage2.2.2 | ca | ERR4830157 | HR-TB | lineage4.8;lineage4.5 | None | ERR4872191 | MDR-TB | lineage4.1.2.1 | None | ERR4832042 | HR-TB | lineage4.8 | vn | ERR4831946 | HR-TB | lineage4.8 | vn | ERR4831493 | Pre-XDR-TB | lineage3 | None | ERR4831503 | Pre-XDR-TB | lineage3 | None | ERR4831508 | Pre-XDR-TB | lineage3 | pk | SRR6785428 | Sensitive | lineage4.1 | None | SRR6797340 | HR-TB | lineage4.2 | None | SRR6896432 | HR-TB | lineage3 | None | SRR6896440 | HR-TB | lineage3 | None | SRR6797575 | HR-TB | lineage1.1.2 | None | SRR833035 | MDR-TB | lineage4.1.1 | None | SRR6964568 | Sensitive | lineage3 | None | ERR3132151 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR502885 | Pre-XDR-TB | lineage2.2.2 | None | ERR3275912 | Sensitive | lineage4.6.1.1 | nl | SRR9224971 | MDR-TB | lineage4.3.4.1 | None | SRR924218 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR8217884 | Sensitive | lineage1.1.1.1 | None | SRR832987 | HR-TB | lineage4.8 | None | SRR6964617 | Pre-XDR-TB | lineage3 | None | SRR847803 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR833155 | HR-TB | lineage4.8 | None | SRR833150 | MDR-TB | lineage4.1.1 | None | SRR9738547 | MDR-TB | lineage4.1.2.1 | None | SAMN02380998 | MDR-TB | lineage4.6.1.2 | ug | SRR9028491 | Pre-XDR-TB | lineage3 | None | SRR7654036 | Sensitive | lineage4.8 | None | SRR7655615 | Sensitive | lineage4.8 | None | SRR9028487 | Pre-XDR-TB | lineage3 | None | SRR7585408 | Sensitive | lineage4.1.2.1 | in | SRR7655613 | Sensitive | lineage4.8 | None | DRR034457 | HR-TB | lineage4.5 | None | SRR9224914 | MDR-TB | lineage4.3.4.1 | None | ERR1034675 | MDR-TB | lineage4.1.2.1 | co | DRR130063 | Pre-XDR-TB | lineage2.2.1 | None | DRR130183 | Pre-XDR-TB | lineage4.3.3 | None | ERR028356 | Sensitive | lineage4.1;lineage1.1.1.1 | None | SRR9028484 | Pre-XDR-TB | lineage3 | None | ERR028361 | HR-TB | lineage4.1.1.3 | None | ERR11043603 | MDR-TB | lineage4.1.4 | None | ERR10680083 | MDR-TB | lineage4.1 | None | ERR10680096 | MDR-TB | lineage4.1 | None | ERR10969128 | RR-TB | lineage4.3.4.2 | None | ERR1213904 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR114478 | Sensitive | lineage4.2.2.2 | None | ERR1367610 | Sensitive | lineage4.1 | None | ERR3324330 | Sensitive | lineage5.1.1;lineage4.8 | None | ERR3273211 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR3335752 | Pre-XDR-TB | lineage3 | pk | ERR3324341 | Sensitive | lineage5.1.1;lineage4.8 | None | ERR3335792 | Pre-XDR-TB | lineage3 | pk | ERR3335789 | Pre-XDR-TB | lineage3 | pk | ERR3335799 | Pre-XDR-TB | lineage3 | pk | ERR386869 | Sensitive | lineage4.1.2.1 | None | ERR3470547 | MDR-TB | lineage3 | None | ERR351937 | Sensitive | lineage4.1.2.1 | None | ERR3335797 | Pre-XDR-TB | lineage3 | pk | ERR403329 | Sensitive | lineage1.1.2 | None | ERR400537 | Other | lineage6.1.3 | None | ERR4025132 | MDR-TB | lineage4.1.2.1 | None | ERR4797410 | Sensitive | lineage3 | in | ERR4195534 | Sensitive | lineage4.1.2.1 | None | ERR4553416 | MDR-TB | None | ERR4553622 | MDR-TB | None | ERR4553628 | MDR-TB | None | ERR4553738 | MDR-TB | lineage4 | None | ERR4553776 | RR-TB | None | ERR403334 | Sensitive | lineage4.1.2.1 | None | ERR4553994 | MDR-TB | None | ERR4797924 | Sensitive | lineage3.1.2 | in | ERR4797793 | HR-TB | lineage3 | in | ERR5897077 | Pre-XDR-TB | lineage3 | None | ERR4798450 | Sensitive | lineage3 | in | ERR4798636 | Sensitive | lineage4.8 | in | ERR4798998 | Pre-XDR-TB | lineage3;lineage2.2.1 | in | ERR11049588 | Sensitive | lineage4.1.2.1 | None | ERR4798359 | Pre-XDR-TB | lineage4.4.1.2 | in | ERR4798395 | MDR-TB | lineage4.4.1.1 | in | ERR4799452 | HR-TB | lineage1.1.2 | in | ERR4799638 | Sensitive | lineage3 | in | ERR4800698 | MDR-TB | lineage1.1.2 | None | ERR4809283 | MDR-TB | lineage4.1.1.3 | za | ERR4812082 | Sensitive | lineage4.1.2.1 | None | ERR5897084 | Pre-XDR-TB | lineage4.9;lineage3 | None | ERR5979540 | MDR-TB | lineage4.1.2.1 | None | ERR5897097 | MDR-TB | lineage4.6.2.1;lineage3 | None | ERR5897099 | Pre-XDR-TB | lineage3 | None | ERR6362936 | MDR-TB | lineage4.4.1.1 | None | ERR6336776 | Sensitive | lineage1.2.1.2.1 | None | ERR6866043 | MDR-TB | lineage4.1.2.1 | None | ERR8975434 | HR-TB | lineage4.3.2.1 | None | ERR6866104 | Sensitive | lineage4.1.2.1 | None | ERR776465 | MDR-TB | lineage4.3.2 | None | ERR779849 | HR-TB | lineage4.1.2.1 | pe | ERR7911290 | MDR-TB | lineage2.1 | vn | ERR7911496 | MDR-TB | lineage1.1.1 | vn | ERR6866546 | HR-TB | lineage4.3.3 | None | ERR6866906 | HR-TB | lineage4.1.2.1 | None | ERR751490 | Sensitive | lineage4.1.2.1 | pe | ERR9027230 | MDR-TB | lineage4.3.3;lineage4.1.2.1 | None | ERR8975717 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10305952 | RR-TB | lineage2.2.1 | None | ERR9119850 | MDR-TB | lineage4.4.1.1 | None | ERR9121568 | Sensitive | lineage4.1.2.1 | None | ERR9286014 | MDR-TB | lineage4.1.4 | None | ERR9786969 | Sensitive | lineage4.1.2.1 | None | SRR1019163 | Pre-XDR-TB | lineage4.1.1 | None | SRR1062888 | MDR-TB | lineage4.6.1.2 | None | SRR11294516 | Other | La1.7.1 | None | ERR9119589 | MDR-TB | lineage4.1.2.1 | None | SRR10305827 | Sensitive | lineage2.2.1 | None | SRR1049599 | MDR-TB | lineage4.6.1.2 | None | SRR1049600 | MDR-TB | lineage4.6.1.2 | None | SRR10520175 | Sensitive | lineage1.1.1 | None | SRR10808429 | Sensitive | lineage4.1.2.1 | None | SRR10808471 | Sensitive | lineage4.1.2.1 | None | SRR11444041 | HR-TB | lineage4.1.2.1 | None | SRR1140717 | MDR-TB | lineage4.6.1.2 | None | SRR1140938 | Pre-XDR-TB | lineage4.1.1 | None | SRR1144789 | MDR-TB | lineage3 | None | SRR1144768 | Pre-XDR-TB | lineage2.2.2 | None | SRR1162894 | MDR-TB | lineage4.1.4 | None | SRR1146416 | MDR-TB | lineage3 | None | SRR1162867 | MDR-TB | lineage4.1.4 | None | SRR1162877 | MDR-TB | lineage4.1.4 | None | SRR1163051 | MDR-TB | lineage3 | None | SRR1162899 | MDR-TB | lineage4.1.4 | None | SRR1163146 | MDR-TB | lineage3 | None | SRR11638839 | Pre-XDR-TB | lineage3 | None | SRR13583399 | MDR-TB | lineage4.3.4.1 | None | SRR1167058 | MDR-TB | lineage4.1.4 | None | SRR1181173 | Pre-XDR-TB | lineage4.1.1 | None | SRR1181326 | Pre-XDR-TB | lineage4.1.1 | None | SRR11972400 | MDR-TB | lineage3 | None | SRR12006559 | Sensitive | lineage1.2.1.2.1 | None | SRR12882566 | MDR-TB | lineage3 | None | SRR1165457 | MDR-TB | lineage4.1.4 | None | SRR1175169 | Other | lineage1.2.2.2 | None | SRR1180200 | Pre-XDR-TB | lineage4.1.1 | None | SRR1180201 | Pre-XDR-TB | lineage4.1.1 | None | SRR1180425 | Pre-XDR-TB | lineage4.1.1 | None | SRR1180436 | Pre-XDR-TB | lineage4.1.1 | None | SRR1181115 | Pre-XDR-TB | lineage4.1.1 | None | SRR1181142 | Pre-XDR-TB | lineage4.1.1 | None | SRR1181354 | Pre-XDR-TB | lineage4.1.1 | None | SRR1183131 | Pre-XDR-TB | lineage4.1.1 | None | SRR1183146 | Pre-XDR-TB | lineage4.1.1 | None | SRR1184020 | Pre-XDR-TB | lineage4.1.1 | None | SRR13583367 | MDR-TB | lineage4.4.1.1 | None | SRR15316238 | MDR-TB | lineage4.4.2 | None | ERR11050554 | HR-TB | lineage4.1.2.1 | None | ERR11050572 | HR-TB | lineage4.1.2.1 | None | SRR14782761 | Sensitive | lineage4.8 | None | SRR15014622 | MDR-TB | lineage1.1.2 | None | SRR15014779 | MDR-TB | lineage1.1.2 | None | SRR16115073 | Sensitive | lineage1.2.1.2 | None | SRR16103911 | Sensitive | lineage1.2.1.2 | None | SRR1792155 | Other | La1.7.1 | None | SRR16370374 | Sensitive | lineage1.2.1.2 | None | SRR16370443 | MDR-TB | lineage4.1.1 | None | SRR20969371 | MDR-TB | lineage4.5 | None | SRR18911563 | Sensitive | lineage1.2.1.2 | None | SRR19276624 | MDR-TB | lineage4.7 | None | SRR18054808 | MDR-TB | lineage4.4.2 | None | SRR18213712 | Sensitive | lineage1.1.2 | None | SRR18213942 | Sensitive | lineage1.1.3.1 | None | SRR18337388 | Sensitive | lineage4.1.2.1 | None | SRR18337389 | Sensitive | lineage4.1.2.1 | None | SRR19128051 | Sensitive | lineage1.2.1.2 | None | SRR20969974 | HR-TB | lineage4.4.2 | None | SRR2100326 | Sensitive | lineage4.2.2.2 | None | SRR2100742 | Sensitive | lineage1.1.2 | None | SRR2100690 | Sensitive | lineage1.1.3.1 | None | SRR2100747 | Sensitive | lineage4.1.2.1 | None | SRR2101274 | Sensitive | lineage4.1.2.1 | None |
|---|
