lineage | Count |
---|---|
lineage4.8 | 14 |
lineage4.1.2.1 | 13 |
lineage3 | 13 |
lineage4.2.2 | 4 |
lineage3.1.2 | 1 |
lineage4.3.2.1 | 4 |
lineage4.3.3 | 4 |
lineage1.1.1 | 3 |
lineage2.2.1 | 1 |
lineage4.3.4.1 | 2 |
lineage1.1.3.1 | 1 |
lineage4.1.4 | 2 |
lineage4.3.2 | 1 |
lineage4.2.1 | 1 |
lineage3.1 | 2 |
lineage3.1.2.1 | 1 |
lineage4.1.2 | 1 |
lineage4 | 1 |
lineage1.2.1.2.1 | 3 |
lineage5.1 | 1 |
lineage4.1.2.1;lineage4.3.4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 74 |
ID | Drug resistance | Lineage | Country iso2 | SRR29274282 | Pre-XDR-TB | lineage4.8 | None | ERR4820617 | Sensitive | lineage4.1.2.1 | gb | SRR28859609 | Pre-XDR-TB | lineage3 | None | ERR2184296 | Sensitive | lineage4.1.2.1 | pe | SRR29539347 | HR-TB | lineage4.8 | None | SRR29274250 | MDR-TB | lineage4.8 | None | ERR2514958 | Sensitive | lineage3 | gb | SRR5067382 | HR-TB | lineage4.2.2 | vn | SRR29274285 | MDR-TB | lineage4.8 | None | ERR13272798 | Sensitive | lineage3 | None | SRR29440796 | Sensitive | lineage3.1.2 | None | ERR4815259 | Sensitive | lineage4.1.2.1 | gb | ERR8976095 | MDR-TB | lineage4.3.2.1 | None | ERR775293 | HR-TB | lineage4.3.3 | pe | SRR2100214 | Sensitive | lineage4.8 | None | ERR117647 | Sensitive | lineage4.8 | None | ERR4831741 | MDR-TB | lineage1.1.1 | None | ERR2510131 | HR-TB | lineage4.3.3 | pe | ERR4815291 | Sensitive | lineage4.8 | None | SRR10808342 | Sensitive | lineage4.1.2.1 | None | SRR5065276 | HR-TB | lineage4.2.2 | vn | ERR9786521 | Sensitive | lineage4.1.2.1 | None | ERR4799103 | Sensitive | lineage3 | in | DRR130159 | RR-TB | lineage2.2.1 | None | SRR29274238 | Pre-XDR-TB | lineage4.8 | None | ERR1035198 | HR-TB | lineage4.3.4.1 | pt | SRR6797535 | Sensitive | lineage1.1.3.1 | None | SRR29274286 | MDR-TB | lineage4.8 | None | SRR5074090 | HR-TB | lineage1.1.1 | vn | ERR9786154 | Sensitive | lineage4.1.2.1 | None | ERR11043542 | Sensitive | lineage3 | None | ERR779877 | HR-TB | lineage4.3.3 | pe | SRR29274252 | MDR-TB | lineage4.8 | None | SRR21722053 | Sensitive | lineage3 | None | SRR28859834 | Pre-XDR-TB | lineage3 | None | SRR13583503 | HR-TB | lineage4.1.4 | None | SRR18213675 | Other | lineage4.8 | None | ERR13260542 | MDR-TB | lineage4.3.2 | None | ERR2514188 | HR-TB | lineage3 | None | ERR9786905 | Sensitive | lineage4.1.2.1 | None | ERR275190 | HR-TB | lineage4.3.4.1 | pt | SRR16088342 | MDR-TB | lineage4.2.1 | None | ERR4829143 | MDR-TB | lineage3.1 | pk | ERR11043897 | Sensitive | lineage3 | None | ERR4831703 | HR-TB | lineage1.1.1 | vn | SRR14088361 | MDR-TB | lineage3.1 | None | ERR2510192 | HR-TB | lineage4.3.3 | pe | SRR28046213 | Sensitive | lineage3.1.2.1 | None | ERR10610298 | MDR-TB | lineage4.3.2.1 | None | ERR9786339 | Sensitive | lineage4.1.2.1 | None | SRR8217904 | HR-TB | lineage4.1.2 | None | ERR13284678 | Sensitive | lineage4 | None | SRR29274259 | Pre-XDR-TB | lineage4.8 | None | ERR11067524 | Sensitive | lineage1.2.1.2.1 | None | ERR270771 | HR-TB | lineage3 | None | ERR3273178 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4819619 | Sensitive | lineage4.8 | gb | ERR13261297 | Sensitive | lineage3 | None | SRR29080997 | MDR-TB | lineage1.2.1.2.1 | None | ERR13292105 | Sensitive | lineage3 | None | ERR11080974 | Sensitive | lineage3 | None | SRR29050719 | HR-TB | lineage4.1.4 | None | ERR9992875 | XDR-TB | lineage4.3.2.1 | None | SRR29274270 | MDR-TB | lineage4.8 | None | SRR7496542 | Sensitive | lineage5.1 | us | ERR9786803 | Sensitive | lineage4.1.2.1 | None | SRR26399535 | MDR-TB | lineage4.2.2 | None | SRR5067435 | MDR-TB | lineage4.2.2 | vn | SRR29126914 | Sensitive | lineage4.1.2.1 | None | SRR28860177 | HR-TB | lineage1.2.1.2.1 | None | ERR552915 | MDR-TB | lineage4.1.2.1;lineage4.3.4.2.1 | None | ERR9634282 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9786301 | Sensitive | lineage4.1.2.1 | None | ERR9806672 | MDR-TB | lineage4.3.2.1 | None |
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