lineage | Count |
---|---|
lineage4.3.3 | 4 |
lineage4.3.4.2 | 1 |
lineage4.1.2.1 | 12 |
lineage4.3.2.1 | 4 |
lineage4.8 | 5 |
lineage4.1.4 | 1 |
lineage3.1 | 2 |
lineage3 | 8 |
lineage1.1.3.1 | 1 |
lineage3.1.1 | 2 |
lineage4.2 | 3 |
lineage4.9 | 1 |
lineage1.1.1 | 3 |
lineage4.3.4.1 | 2 |
1 | |
lineage5 | 1 |
lineage4.1.2 | 1 |
lineage1.2.1.2.1 | 1 |
lineage2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 54 |
ID | Drug resistance | Lineage | Country iso2 | ERR775293 | HR-TB | lineage4.3.3 | pe | ERR7801183 | Other | lineage4.3.4.2 | None | ERR779877 | HR-TB | lineage4.3.3 | pe | ERR9786521 | Sensitive | lineage4.1.2.1 | None | ERR9786301 | Sensitive | lineage4.1.2.1 | None | ERR8976095 | MDR-TB | lineage4.3.2.1 | None | ERR9634282 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9786154 | Sensitive | lineage4.1.2.1 | None | ERR9786339 | Sensitive | lineage4.1.2.1 | None | ERR9786905 | Sensitive | lineage4.1.2.1 | None | ERR9786803 | Sensitive | lineage4.1.2.1 | None | SRR10808342 | Sensitive | lineage4.1.2.1 | None | ERR9992875 | XDR-TB | lineage4.3.2.1 | None | SRR18213675 | Other | lineage4.8 | None | SRR13583503 | HR-TB | lineage4.1.4 | None | SRR14088361 | MDR-TB | lineage3.1 | None | SRR2100214 | Sensitive | lineage4.8 | None | ERR9806672 | MDR-TB | lineage4.3.2.1 | None | SRR21722053 | Sensitive | lineage3 | None | ERR11080974 | Sensitive | lineage3 | None | ERR4815259 | Sensitive | lineage4.1.2.1 | gb | ERR10610298 | MDR-TB | lineage4.3.2.1 | None | SRR6797535 | Sensitive | lineage1.1.3.1 | None | SRR3082079 | MDR-TB | lineage3.1.1 | None | ERR4815291 | Sensitive | lineage4.8 | None | SRR5067382 | HR-TB | lineage4.2 | vn | SRR3085333 | MDR-TB | lineage3.1.1 | None | ERR2245361 | Sensitive | lineage4.9 | None | ERR2184296 | Sensitive | lineage4.1.2.1 | pe | SRR5074090 | HR-TB | lineage1.1.1 | vn | ERR2510192 | HR-TB | lineage4.3.3 | pe | SRR5067435 | MDR-TB | lineage4.2 | vn | ERR2510131 | HR-TB | lineage4.3.3 | pe | SRR5065276 | HR-TB | lineage4.2 | vn | ERR4819619 | Sensitive | lineage4.8 | gb | ERR2514188 | HR-TB | lineage3 | None | ERR2514958 | Sensitive | lineage3 | gb | ERR4831703 | HR-TB | lineage1.1.1 | vn | ERR4820617 | Sensitive | lineage4.1.2.1 | gb | ERR275190 | HR-TB | lineage4.3.4.1 | pt | ERR270771 | HR-TB | lineage3 | None | ERR4829143 | MDR-TB | lineage3.1 | pk | SRR6046587 | Sensitive | None | ERR4831741 | MDR-TB | lineage1.1.1 | None | SRR7496542 | Sensitive | lineage5 | us | SRR8217904 | HR-TB | lineage4.1.2 | None | ERR11067524 | Sensitive | lineage1.2.1.2.1 | None | DRR130159 | RR-TB | lineage2.2.1 | None | ERR1035198 | HR-TB | lineage4.3.4.1 | pt | ERR3273178 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11043542 | Sensitive | lineage3 | None | ERR11043897 | Sensitive | lineage3 | None | ERR117647 | Sensitive | lineage4.8 | None | ERR4799103 | Sensitive | lineage3 | in |
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