lineage | Count |
---|---|
lineage4.3.3 | 15 |
lineage2.2.2 | 3 |
lineage3 | 1 |
lineage4.9 | 2 |
lineage4.5 | 3 |
lineage2.2.1 | 3 |
lineage2.2.1;lineage4.3.3 | 1 |
lineage1.2.2.2 | 2 |
lineage4.3.1 | 1 |
lineage4.3.4.2 | 2 |
lineage1.2.1.2.1 | 1 |
lineage5.1.4 | 2 |
lineage1.1.2 | 1 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 38 |
ID | Drug resistance | Lineage | Country iso2 | ERR5866289 | MDR-TB | lineage4.3.3 | None | ERR5866147 | MDR-TB | lineage4.3.3 | None | SRR12142426 | MDR-TB | lineage2.2.2 | None | ERR5866142 | MDR-TB | lineage4.3.3 | None | ERR2516257 | MDR-TB | lineage4.3.3 | be | ERR4797263 | MDR-TB | lineage3 | in | ERR3148038 | Pre-XDR-TB | lineage4.9 | None | ERR11069076 | HR-TB | lineage4.5 | None | SRR12142420 | MDR-TB | lineage2.2.2 | None | ERR158595 | MDR-TB | lineage4.3.3 | ru | SRR15315941 | Pre-XDR-TB | lineage2.2.1 | None | SRR7516374 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR137201 | HR-TB | lineage4.3.3 | ru | ERR4800252 | Other | lineage4.3.3 | in | ERR5866144 | MDR-TB | lineage4.3.3 | None | SRR21276920 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351331 | RR-TB | lineage1.2.2.2 | None | ERR4407467 | Sensitive | lineage4.3.1 | None | ERR2653171 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR5866143 | MDR-TB | lineage4.3.3 | None | ERR11049602 | Sensitive | lineage1.2.1.2.1 | None | ERR3287649 | MDR-TB | lineage4.3.3 | pe | ERR13285148 | Pre-XDR-TB | lineage4.9 | None | ERR439949 | Sensitive | lineage5.1.4 | None | SRR28498653 | MDR-TB | lineage4.3.3 | None | ERR4811644 | MDR-TB | lineage2.2.1 | cn | SRR10809076 | Sensitive | lineage1.2.2.2 | None | ERR11050282 | MDR-TB | lineage4.5 | None | ERR5866287 | MDR-TB | lineage4.3.3 | None | ERR3287800 | MDR-TB | lineage4.3.4.2 | pe | ERR439973 | MDR-TB | lineage5.1.4 | None | ERR11050281 | MDR-TB | lineage4.5 | None | SRR12142427 | MDR-TB | lineage2.2.2 | None | ERR5866146 | MDR-TB | lineage4.3.3 | None | ERR9030295 | MDR-TB | lineage1.1.2 | None | ERR5866288 | MDR-TB | lineage4.3.3 | None | ERR4813928 | HR-TB | lineage4.1.2.1 | None | ERR5866145 | MDR-TB | lineage4.3.3 | None |
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