lineage | Count |
---|---|
lineage1.1.1.1 | 7 |
lineage3 | 3 |
lineage4.2.2.2 | 1 |
lineage1.1.2 | 7 |
lineage2.2.2 | 1 |
lineage4.1.2.1 | 6 |
lineage4.4.1.2 | 2 |
lineage1.1.1 | 2 |
lineage3.1.2.1 | 2 |
lineage2.2.1 | 2 |
lineage1.2.1.2.1 | 3 |
lineage4.3.3 | 1 |
lineage1.1.3.1 | 1 |
lineage1.2.1.1 | 1 |
lineage1.2.2.2;lineage3 | 1 |
lineage1.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 41 |
ID | Drug resistance | Lineage | Country iso2 | SRR29050782 | Sensitive | lineage1.1.1.1 | None | ERR4820889 | Other | lineage3 | gb | SRR15014747 | MDR-TB | lineage4.2.2.2 | None | SRR5073846 | Sensitive | lineage1.1.1.1 | vn | SRR21722233 | Sensitive | lineage1.1.2 | None | DRR130165 | Pre-XDR-TB | lineage2.2.2 | None | ERR4828762 | Sensitive | lineage1.1.1.1 | vn | ERR6879050 | MDR-TB | lineage4.1.2.1 | None | SRR5065379 | Sensitive | lineage1.1.1.1 | vn | SRR5073891 | Sensitive | lineage1.1.1.1 | vn | SRR2100888 | HR-TB | lineage4.4.1.2 | None | DRR261060 | Sensitive | lineage1.1.1 | None | SRR28045764 | Sensitive | lineage1.1.2 | None | SRR29016884 | RR-TB | lineage3.1.2.1 | None | SRR25340938 | MDR-TB | lineage1.1.2 | None | SRR5217399 | Sensitive | lineage2.2.1 | None | ERR3256110 | MDR-TB | lineage1.2.1.2.1 | ph | ERR6866862 | Sensitive | lineage4.3.3 | None | SRR22251376 | HR-TB | lineage1.1.1.1 | None | SRR29772473 | MDR-TB | lineage1.1.2 | None | SRR29017584 | MDR-TB | lineage1.1.3.1 | None | SRR29772386 | MDR-TB | lineage1.1.2 | None | ERR11081794 | MDR-TB | lineage4.1.2.1 | None | SRR7517765 | MDR-TB | lineage2.2.1 | ch | ERR11049932 | Sensitive | lineage4.1.2.1 | None | SRR29053121 | HR-TB | lineage1.2.1.2.1 | None | ERR13284728 | MDR-TB | lineage4.1.2.1 | None | SRR19317582 | HR-TB | lineage1.2.1.2.1 | None | SRR21689851 | Sensitive | lineage1.2.1.1 | None | SRR29126502 | Sensitive | lineage3 | None | SRR25827684 | Pre-XDR-TB | lineage1.1.2 | None | ERR13291822 | Sensitive | lineage1.1.2 | None | ERR270788 | HR-TB | lineage4.4.1.2 | None | SRR28239580 | Sensitive | lineage4.1.2.1 | None | ERR1034802 | MDR-TB | lineage4.1.2.1 | pe | ERR4553677 | RR-TB | lineage3.1.2.1 | None | SRR12882639 | Sensitive | lineage3 | None | SRR26399726 | Other | lineage1.1.1 | None | ERR13266552 | HR-TB | lineage1.2.2.2;lineage3 | None | SRR27450012 | Sensitive | lineage1.2.1.2 | None | SRR26399400 | Sensitive | lineage1.1.1.1 | None |
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