lineage | Count |
---|---|
lineage2.1 | 3 |
lineage4.8 | 2 |
lineage4.3.4.2 | 8 |
lineage2.2.1 | 3 |
lineage4.3.4.1 | 14 |
lineage1.1.2 | 6 |
lineage3.1.2 | 2 |
lineage4.2.1 | 3 |
lineage1.2.1.2.1 | 2 |
lineage4.5 | 1 |
lineage3 | 3 |
lineage4.4.1.1 | 1 |
lineage4.1.2.1 | 1 |
lineage1.2.2.2 | 1 |
lineage3.1.1 | 1 |
spoligotype | Count |
---|---|
None | 51 |
ID | Drug resistance | Lineage | Country iso2 | ERR8773618 | MDR-TB | lineage2.1 | None | SRR6485139 | Other | lineage4.8 | None | ERR775794 | MDR-TB | lineage2.1 | th | SRR6797563 | MDR-TB | lineage4.3.4.2 | None | SRR5065527 | Other | lineage2.2.1 | None | ERR10610194 | MDR-TB | lineage4.3.4.1 | None | ERR11488579 | MDR-TB | lineage4.3.4.1 | None | SRR29017047 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR16058454 | Sensitive | lineage1.1.2 | None | ERR11488808 | MDR-TB | lineage4.3.4.1 | None | SRR17658007 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR5987306 | MDR-TB | lineage4.3.4.1 | None | SRR28046351 | HR-TB | lineage3.1.2 | None | ERR11488970 | XDR-TB | lineage4.3.4.1 | None | SRR28239569 | Sensitive | lineage4.2.1 | None | ERR3132233 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR9806633 | MDR-TB | lineage4.3.4.1 | None | ERR2124091 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR9657201 | Sensitive | lineage1.2.1.2.1 | None | ERR11488964 | XDR-TB | lineage4.3.4.1 | None | ERR2510429 | MDR-TB | lineage1.1.2 | pk | ERR2515903 | MDR-TB | lineage4.3.4.1 | za | ERR4813842 | HR-TB | lineage4.3.4.1 | None | ERR4553405 | MDR-TB | lineage4.3.4.2 | None | SRR8380895 | MDR-TB | lineage1.1.2 | in | ERR4799191 | Sensitive | lineage3.1.2 | in | SRR15315972 | MDR-TB | lineage4.5 | None | SRR15014661 | MDR-TB | lineage1.1.2 | None | SRR28239570 | Sensitive | lineage4.2.1 | None | SRR5341338 | Pre-XDR-TB | lineage3 | in | ERR2512402 | HR-TB | lineage1.1.2 | gb | ERR8773616 | MDR-TB | lineage2.1 | None | ERR9125878 | Sensitive | lineage1.1.2 | None | SRR29017196 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1023526 | MDR-TB | lineage4.3.4.1 | None | ERR4829660 | Sensitive | lineage4.4.1.1 | it | ERR9119794 | MDR-TB | lineage4.3.4.1 | None | ERR6362439 | MDR-TB | lineage4.3.4.1 | None | SRR1019184 | Sensitive | lineage2.2.1 | None | ERR11068791 | Sensitive | lineage4.1.2.1 | None | SRR4423157 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR1011509 | Sensitive | lineage2.2.1 | None | ERR4819689 | MDR-TB | lineage1.2.2.2 | gb | ERR9120100 | MDR-TB | lineage4.3.4.1 | None | SRR6484977 | Other | lineage4.8 | None | ERR4818080 | HR-TB | lineage1.2.1.2.1 | gb | SRR5341457 | Other | lineage3 | None | SRR28239536 | Sensitive | lineage4.2.1 | None | ERR9120099 | MDR-TB | lineage4.3.4.1 | None | ERR13262098 | HR-TB | lineage3 | None | ERR9030525 | HR-TB | lineage3.1.1 | None |
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