lineage | Count |
---|---|
lineage4.1.2.1 | 8 |
lineage3 | 8 |
lineage4.8 | 16 |
lineage2.2.1;lineage4.3.2.1 | 1 |
lineage1.1.1.1 | 3 |
lineage4.3.2.1 | 2 |
lineage4.3.3 | 2 |
lineage2.2.1;lineage4.3 | 1 |
lineage4.3.4.1 | 2 |
lineage4.3.4.2 | 2 |
lineage4.4.2 | 5 |
lineage3.1.2 | 2 |
lineage1.2.2.1 | 1 |
lineage1.1.2 | 4 |
lineage4.1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 58 |
ID | Drug resistance | Lineage | Country iso2 | ERR4813290 | MDR-TB | lineage4.1.2.1 | pe | ERR4829858 | Other | lineage3 | it | ERR13290267 | MDR-TB | lineage4.8 | None | SRR25395645 | HR-TB | lineage4.8 | None | SAMN02414877 | MDR-TB | lineage4.8 | se | SRR29274069 | MDR-TB | lineage4.1.2.1 | None | SRR2099977 | HR-TB | lineage3 | None | ERR270687 | HR-TB | lineage3 | None | SRR10315480 | MDR-TB | lineage2.2.1;lineage4.3.2.1 | None | SRR26399830 | Sensitive | lineage1.1.1.1 | None | SRR1165600 | MDR-TB | lineage4.8 | None | SRR1166922 | MDR-TB | lineage4.8 | None | ERR4830552 | MDR-TB | lineage4.3.2.1 | None | ERR13284622 | MDR-TB | lineage4.3.3 | None | SRR6785155 | HR-TB | lineage2.2.1;lineage4.3 | None | SRR18213901 | HR-TB | lineage3 | None | ERR11043427 | MDR-TB | lineage4.3.3 | None | SRR1166710 | MDR-TB | lineage4.8 | None | ERR11465284 | Sensitive | lineage4.3.4.1 | None | SRR18149479 | Sensitive | lineage4.3.4.2 | None | SRR11567783 | MDR-TB | lineage4.4.2 | None | SRR2100343 | HR-TB | lineage4.1.2.1 | None | SAMN02414844 | MDR-TB | lineage4.8 | se | ERR13290269 | MDR-TB | lineage4.8 | None | SRR20139563 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR20139557 | MDR-TB | lineage4.8 | None | ERR13260109 | MDR-TB | lineage4.1.2.1 | None | SRR1165592 | MDR-TB | lineage4.8 | None | SRR8651643 | MDR-TB | lineage4.4.2 | cn | SRR8651625 | MDR-TB | lineage4.4.2 | cn | ERR13266505 | Pre-XDR-TB | lineage3.1.2 | None | ERR13290266 | MDR-TB | lineage4.8 | None | ERR13261599 | MDR-TB | lineage4.1.2.1 | None | SRR11567785 | MDR-TB | lineage4.4.2 | None | SRR11567784 | MDR-TB | lineage4.4.2 | None | ERR4829740 | Sensitive | lineage4.1.2.1 | None | ERR13290268 | MDR-TB | lineage4.8 | None | SRR1165512 | MDR-TB | lineage4.8 | None | ERR9119296 | Sensitive | lineage1.1.1.1 | None | ERR11488614 | MDR-TB | lineage1.2.2.1 | None | ERR4796457 | Sensitive | lineage1.1.2 | None | ERR13266071 | Pre-XDR-TB | lineage3.1.2 | None | ERR9030401 | HR-TB | lineage1.1.2 | None | ERR4799084 | Sensitive | lineage3 | in | SRR18912998 | Sensitive | lineage3 | None | ERR114496 | HR-TB | lineage4.1.2.1 | None | ERR4812802 | MDR-TB | lineage4.1.2.1 | None | SRR1162720 | MDR-TB | lineage4.8 | None | SRR1165544 | MDR-TB | lineage4.8 | None | ERR4817769 | HR-TB | lineage1.1.2 | None | ERR4829897 | Other | lineage3 | None | ERR13292429 | Sensitive | lineage3 | None | ERR11465283 | Sensitive | lineage4.3.4.1 | None | ERR9117688 | Sensitive | lineage4.1.1.1 | None | SRR1162828 | MDR-TB | lineage4.8 | None | ERR11489000 | MDR-TB | lineage1.1.2 | None | ERR4830367 | Sensitive | lineage1.1.1.1 | vn | SRR9971159 | MDR-TB | lineage4.3.2.1 | None |
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