ERR4813079
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813536
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMEA5569996
|
MDR-TB
|
lineage4.3.2;lineage4.3.3
|
None
|
ERR4813025
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR775338
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR6866277
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR551797
|
MDR-TB
|
lineage4.8
|
None
|
ERR3132208
|
Other
|
lineage4.1.2.1
|
None
|
ERR775388
|
MDR-TB
|
lineage4.3.3
|
pe
|
SAMEA2535039
|
MDR-TB
|
lineage4.8
|
uz
|
SRR17234904
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7911009
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6866931
|
Sensitive
|
lineage4.1.4
|
None
|
ERR4813339
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287749
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR551798
|
MDR-TB
|
lineage4.8
|
None
|
SRR28393563
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034757
|
MDR-TB
|
lineage4.3.3;lineage4.3.4.1
|
pe
|
SRR12006713
|
Sensitive
|
lineage1.2.1.2
|
None
|
ERR751509
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260161
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4024938
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR6866995
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR13430443
|
HR-TB
|
lineage4
|
None
|
ERR13260229
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMEA5569998
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28393969
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28393462
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393253
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2510372
|
HR-TB
|
lineage3
|
pk
|
ERR2510428
|
MDR-TB
|
lineage3
|
pk
|
ERR4812806
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4831951
|
HR-TB
|
lineage4.4.2
|
vn
|
ERR13261914
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751616
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260237
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393764
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393366
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393431
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812958
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813342
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751629
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2510153
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR552970
|
MDR-TB
|
lineage4.8
|
None
|
ERR7910860
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260438
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29772569
|
MDR-TB
|
lineage3
|
None
|
ERR551128
|
MDR-TB
|
lineage4.8
|
None
|
SRR28394183
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28394216
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR7517834
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812964
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812993
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22461695
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4829788
|
MDR-TB
|
lineage4.3.3
|
it
|
ERR7911376
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR10808671
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813031
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6879047
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287766
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7910880
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812749
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR551888
|
HR-TB
|
lineage4.8
|
None
|
ERR4828223
|
Sensitive
|
lineage1.1.1.1
|
None
|
ERR13260193
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260211
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261885
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6866131
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR10561954
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393364
|
XDR-TB
|
lineage4.3.3
|
None
|
SRR28385884
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR27450367
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
ERR552970_ERR552971
|
MDR-TB
|
lineage4.8
|
None
|
ERR551887_ERR551888
|
MDR-TB
|
lineage4.8
|
None
|
ERR4811913
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR29748787
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29126491
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9029849
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2516527
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2516563
|
Other
|
lineage4.1.2.1
|
nl
|
ERR2516668
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4178154
|
HR-TB
|
lineage4.3.3
|
None
|
ERR3287691
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13267441
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2510194
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812805
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4811979
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813007
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287610
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR751609
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR16088141
|
HR-TB
|
lineage4
|
None
|
ERR4813604
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR22461610
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13267438
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR6879033
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751548
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR751571
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287426
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4025035
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28385880
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4813073
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7911012
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287634
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9029854
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMEA2534200
|
MDR-TB
|
lineage4.8
|
uz
|
ERR551128_ERR551129
|
MDR-TB
|
lineage4.8
|
None
|
ERR4813563
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813642
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813703
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR5065244
|
HR-TB
|
lineage4.4.2
|
vn
|
ERR551798_ERR551797
|
MDR-TB
|
lineage4.8
|
None
|
ERR2516490
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR775328
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13261925
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260208
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261904
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393917
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR779890
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR12117934
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28393556
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393968
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393553
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393843
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393460
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393767
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28394128
|
MDR-TB
|
lineage4.1.2.1;lineage4.3.3
|
None
|
SRR28393365
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28394120
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393844
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751365
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260652
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261923
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261933
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2516628
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR12118056
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28393412
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22461585
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13195613
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR13260224
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR26399612
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR13260135
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4822586
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.8
|
tm
|
ERR2184353
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260210
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7975665
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR13260168
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261922
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813716
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287872
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260195
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6865602
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393277
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR6879035
|
MDR-TB
|
lineage4.3.3;lineage4.3.4.1
|
None
|
ERR4812847
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6797647
|
Sensitive
|
lineage1.1.3.1
|
None
|
ERR751436
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2510238
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813082
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13261892
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287685
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260696
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812995
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287747
|
MDR-TB
|
lineage4.3.3
|
pe
|
SAMEA2533722
|
MDR-TB
|
lineage4.8
|
uz
|
ERR2510232
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287470
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751595
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR552971
|
MDR-TB
|
lineage4.8
|
None
|
ERR12117983
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1166131
|
MDR-TB
|
lineage4.8
|
ro
|
ERR4813731
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7910859
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260230
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260693
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR551129
|
MDR-TB
|
lineage4.8
|
None
|
ERR3287804
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28394259
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812632
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6866164
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6865695
|
HR-TB
|
lineage4.3.3
|
None
|
ERR1034748
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR9029855
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393429
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812950
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260682
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813686
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260188
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR3732570
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9029851
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28393909
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR12118043
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813384
|
MDR-TB
|
lineage4.1.1;lineage4.3.3
|
pe
|
ERR6879034
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034750
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR8773857
|
HR-TB
|
lineage4
|
None
|
ERR551887
|
HR-TB
|
lineage4.8
|
None
|
ERR13261915
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393904
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393469
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28394092
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393943
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393367
|
MDR-TB
|
lineage4.1.2.1;lineage4.3.3
|
None
|
SRR28393314
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034600
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR7911367
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR6865324
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR13430442
|
HR-TB
|
lineage4
|
None
|
SAMEA5569803
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4796687
|
Sensitive
|
lineage3
|
in
|
SAMEA5569827
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287813
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287732
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287818
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR775358
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812279
|
RR-TB
|
lineage4.1.4
|
None
|
ERR13260617
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6866534
|
Sensitive
|
lineage4.1.4
|
None
|
ERR12117909
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393676
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260639
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812692
|
Sensitive
|
lineage4.1.4
|
None
|
ERR3287854
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR16088455
|
HR-TB
|
lineage4
|
None
|
ERR751437
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR12117970
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813053
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261675
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287725
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813019
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28394300
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751591
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
SRR16370478
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260227
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13259976
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13260212
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812521
|
Sensitive
|
lineage4.1.4
|
pe
|
ERR4813623
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR8773859
|
HR-TB
|
lineage4
|
None
|
SRR13870403
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR751543
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2510309
|
MDR-TB
|
lineage3
|
pk
|
ERR4822594
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.8
|
tm
|
SRR29081653
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260702
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260697
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393473
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261618
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751416
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260219
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287363
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
SRR2101171
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR3287786
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR1034798
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260128
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261600
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261648
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812776
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287374
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812877
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034703
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287803
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR330733
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4813364
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751351
|
MDR-TB
|
lineage4.3.3
|
pe
|
SAMEA2534268
|
MDR-TB
|
lineage4.8
|
uz
|
ERR688032
|
Pre-XDR-TB
|
lineage3
|
None
|