lineage | Count |
---|---|
lineage4.2.2.2 | 20 |
lineage2.2.2 | 24 |
lineage4.3.3 | 7 |
lineage4.3.4.1 | 1 |
lineage3 | 7 |
lineage6.3.1 | 2 |
lineage2.2 | 16 |
lineage1.2.1.2 | 1 |
lineage4.3.4.2.1 | 3 |
lineage4.3.2 | 2 |
lineage4.3.3;lineage4.8 | 4 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 88 |
ID | Drug resistance | Lineage | Country iso2 | ERR4830830 | Pre-XDR-TB | lineage4.2.2.2 | et | SRR29096523 | MDR-TB | lineage4.2.2.2 | None | ERR2020044 | Pre-XDR-TB | lineage2.2.2 | None | ERR13290600 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR2517569 | MDR-TB | lineage4.2.2.2 | nl | ERR6865333 | Sensitive | lineage4.3.3 | None | ERR133977 | HR-TB | lineage4.3.4.1 | ru | ERR4821780 | HR-TB | lineage2.2.2 | gb | SRR22249424 | Sensitive | lineage3 | None | SRR29016888 | MDR-TB | lineage2.2.2 | None | ERR2516316 | MDR-TB | lineage6.3.1 | be | ERR4553850 | MDR-TB | lineage2.2 | None | ERR4553671 | MDR-TB | lineage2.2 | None | ERR4830822 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR4797752 | Sensitive | lineage3 | in | SRR29017417 | MDR-TB | lineage2.2.2 | None | ERR4553893 | Pre-XDR-TB | lineage2.2 | None | SRR30182897 | Sensitive | lineage1.2.1.2 | None | ERR4830799 | MDR-TB | lineage4.2.2.2 | et | SRR1165366 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR13290598 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR4553898 | MDR-TB | lineage2.2.2 | None | ERR4553774 | Pre-XDR-TB | lineage2.2 | None | SRR4423153 | Pre-XDR-TB | lineage2.2.2 | None | ERR4553702 | MDR-TB | lineage2.2 | None | ERR4553877 | MDR-TB | lineage2.2.2 | None | ERR7801214 | HR-TB | lineage4.3.4.2.1 | None | ERR4553578 | MDR-TB | lineage2.2.2 | None | ERR4553868 | MDR-TB | lineage2.2 | None | SRR6152785 | Sensitive | lineage3 | ca | ERR4553662 | MDR-TB | lineage2.2 | None | SRR29017412 | MDR-TB | lineage2.2.2 | None | ERR7737624 | MDR-TB | lineage4.2.2.2 | None | SRR10147698 | MDR-TB | lineage4.3.3 | None | ERR4553659 | MDR-TB | lineage2.2 | None | ERR13291928 | Sensitive | lineage4.3.2 | None | ERR4024946 | Sensitive | lineage4.3.3 | None | ERR4553939 | MDR-TB | lineage2.2.2 | None | ERR4798601 | Sensitive | lineage3 | in | ERR4830803 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR3132174 | MDR-TB | lineage4.3.3 | None | SRR29017045 | Pre-XDR-TB | lineage2.2.2 | None | ERR2516338 | MDR-TB | lineage6.3.1 | None | ERR7737654 | MDR-TB | lineage4.2.2.2 | None | ERR7801215 | HR-TB | lineage4.3.4.2.1 | None | SRR4423146 | Pre-XDR-TB | lineage2.2.2 | None | SRR4423148 | Pre-XDR-TB | lineage2.2.2 | None | ERR4797064 | Sensitive | lineage3 | in | ERR4830766 | MDR-TB | lineage4.3.3 | ir | ERR4812949 | MDR-TB | lineage4.3.2 | pe | SRR4423174 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1166935 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR4553904 | Pre-XDR-TB | lineage2.2 | None | SRR1167151 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR1162897 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR29017176 | MDR-TB | lineage2.2.2 | None | ERR4553579 | MDR-TB | lineage2.2.2 | None | SRR1168976 | MDR-TB | lineage4.1.2.1 | None | SRR4423139 | Pre-XDR-TB | lineage2.2.2 | None | SRR25827843 | Sensitive | lineage3 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR4799488 | Sensitive | lineage3 | in | ERR4553825 | MDR-TB | lineage2.2 | None | SRR17657953 | MDR-TB | lineage4.3.3 | None | ERR2446183 | MDR-TB | lineage4.2.2.2 | nl | ERR7801216 | HR-TB | lineage4.3.4.2.1 | None | ERR3275336 | MDR-TB | lineage4.2.2.2 | nl | ERR4830845 | MDR-TB | lineage4.2.2.2 | et | ERR4553603 | MDR-TB | lineage2.2 | None | ERR1213923 | MDR-TB | lineage4.3.3 | pe | SRR29017142 | MDR-TB | lineage2.2.2 | None | ERR4011971 | MDR-TB | lineage4.2.2.2 | None | ERR4553889 | Pre-XDR-TB | lineage2.2 | None | ERR4553725 | MDR-TB | lineage2.2 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR4830805 | MDR-TB | lineage4.2.2.2 | et | SRR29017395 | MDR-TB | lineage2.2.2 | None | SRR29017383 | MDR-TB | lineage2.2.2 | None | SRR29017122 | MDR-TB | lineage2.2.2 | None | ERR4553907 | MDR-TB | lineage2.2 | None | ERR4553534 | MDR-TB | lineage2.2.2 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SAMN02414970 | Pre-XDR-TB | lineage4.2.2.2 | se | ERR4553872 | MDR-TB | lineage2.2.2 | None | ERR4553664 | MDR-TB | lineage2.2 | None | ERR4553630 | MDR-TB | lineage2.2 | None | ERR4553944 | MDR-TB | lineage2.2.2 | None |
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