lineage | Count |
---|---|
lineage2.2.1 | 2 |
lineage4.3.3 | 1 |
lineage4.7 | 2 |
lineage4.4.1.1 | 2 |
lineage4.6.2.2 | 1 |
lineage4.3.4.2 | 1 |
lineage3.1.2 | 10 |
lineage4.1.1 | 1 |
lineage4.5 | 2 |
lineage1.1.2 | 1 |
lineage3.1.2;lineage4.5 | 1 |
lineage1.2.2.2 | 1 |
lineage1.1.3.1 | 1 |
lineage4.1.2.1 | 1 |
lineage3 | 3 |
lineage2.2.2 | 1 |
lineage1.1.1 | 1 |
1 |
spoligotype | Count |
---|---|
None | 33 |
ID | Drug resistance | Lineage | Country iso2 | ERR2514012 | Sensitive | lineage2.2.1 | gb | SRR6785270 | MDR-TB | lineage4.3.3 | None | SRR29231656 | MDR-TB | lineage4.7 | None | SRR29273647 | MDR-TB | lineage4.4.1.1 | None | ERR1679633 | MDR-TB | lineage4.6.2.2 | None | ERR1034818 | HR-TB | lineage4.3.4.2 | pt | ERR4829183 | MDR-TB | lineage3.1.2 | it | ERR13259995 | MDR-TB | lineage4.1.1 | None | SRR7829583 | MDR-TB | lineage3.1.2 | None | ERR13284403 | MDR-TB | lineage4.5 | None | ERR2707062 | MDR-TB | lineage4.7 | cd | SRR29772565 | MDR-TB | lineage1.1.2 | None | ERR4798167 | Sensitive | lineage3.1.2;lineage4.5 | in | SRR28860154 | HR-TB | lineage1.2.2.2 | None | SRR26112789 | Sensitive | lineage1.1.3.1 | None | ERR4816210 | MDR-TB | lineage3.1.2 | gb | SRR29017547 | MDR-TB | lineage4.1.2.1 | None | ERR4821571 | MDR-TB | lineage3.1.2 | None | ERR3275814 | Sensitive | lineage3 | nl | SRR24061591 | MDR-TB | lineage3.1.2 | None | ERR4814534 | MDR-TB | lineage3.1.2 | gb | SRR29126399 | HR-TB | lineage3.1.2 | None | SRR29273712 | MDR-TB | lineage4.4.1.1 | None | ERR2510662 | MDR-TB | lineage3.1.2 | it | SRR29385423 | Pre-XDR-TB | lineage2.2.2 | None | ERR4817202 | MDR-TB | lineage3.1.2 | gb | SRR12882303 | HR-TB | lineage1.1.1 | None | ERR4814531 | MDR-TB | lineage3.1.2 | None | SRR29017522 | MDR-TB | lineage3 | None | ERR4553449 | MDR-TB | None | SRR7070517 | Sensitive | lineage2.2.1 | None | SRR21690996 | Sensitive | lineage3 | None | ERR11082572 | MDR-TB | lineage4.5 | None |
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