lineage | Count |
---|---|
lineage3;lineage1.2.2.2 | 3 |
lineage4.3.4.2.1 | 5 |
lineage3 | 3 |
lineage4.6.1.2 | 23 |
lineage4.4.1.1 | 2 |
lineage4.8 | 1 |
lineage4.2.1 | 2 |
lineage2.2.1 | 1 |
lineage4.7 | 1 |
spoligotype | Count |
---|---|
None | 41 |
ID | Drug resistance | Lineage | Country iso2 | SRR2100918 | HR-TB | lineage3;lineage1.2.2.2 | None | SRR5535835 | MDR-TB | lineage4.3.4.2.1 | None | ERR4818321 | Sensitive | lineage3 | None | ERR551253 | MDR-TB | lineage4.6.1.2 | cg | ERR2510681 | HR-TB | lineage4.4.1.1 | it | ERR2707206 | MDR-TB | lineage4.6.1.2 | cd | ERR4822375 | HR-TB | lineage4.8 | kg | ERR2707051 | MDR-TB | lineage4.6.1.2 | cd | ERR2707072 | Pre-XDR-TB | lineage4.6.1.2 | cd | ERR2707113 | MDR-TB | lineage4.3.4.2.1 | cd | ERR2707222 | MDR-TB | lineage4.3.4.2.1 | cd | ERR2707224 | MDR-TB | lineage4.6.1.2 | cd | ERR2706915 | MDR-TB | lineage4.6.1.2 | cd | ERR2706920 | MDR-TB | lineage4.6.1.2 | cd | ERR2706968 | MDR-TB | lineage4.6.1.2 | cd | ERR278531 | HR-TB | lineage3;lineage1.2.2.2 | None | ERR2706993 | MDR-TB | lineage4.6.1.2 | cd | ERR2707052 | MDR-TB | lineage4.6.1.2 | cd | ERR2707009 | MDR-TB | lineage4.6.1.2 | cd | ERR2707016 | MDR-TB | lineage4.6.1.2 | cd | ERR2707099 | MDR-TB | lineage4.6.1.2 | cd | ERR2707142 | MDR-TB | lineage4.6.1.2 | cd | ERR2707124 | MDR-TB | lineage4.6.1.2 | cd | ERR2707161 | MDR-TB | lineage4.6.1.2 | cd | SRR6964668 | Pre-XDR-TB | lineage3 | None | ERR10748216 | MDR-TB | lineage4.6.1.2 | None | SRR7829595 | HR-TB | lineage4.4.1.1 | None | ERR1199106 | MDR-TB | lineage4.6.1.2 | cd | ERR10748540 | MDR-TB | lineage4.6.1.2 | None | ERR1199093 | MDR-TB | lineage4.6.1.2 | None | ERR1199108 | MDR-TB | lineage4.6.1.2 | cd | ERR1199115 | MDR-TB | lineage4.6.1.2 | cd | ERR1199127 | MDR-TB | lineage4.6.1.2 | cd | ERR386890 | HR-TB | lineage3;lineage1.2.2.2 | None | ERR9117682 | Sensitive | lineage3 | None | ERR4423752 | MDR-TB | lineage4.3.4.2.1 | None | ERR5908227 | HR-TB | lineage4.2.1 | None | ERR4423751 | MDR-TB | lineage4.3.4.2.1 | None | ERR8665607 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119086 | HR-TB | lineage4.2.1 | None | SRR14164938 | Sensitive | lineage4.7 | None |
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