lineage | Count |
---|---|
lineage4.1.4 | 1 |
lineage1.2.1.2 | 2 |
lineage4.5 | 4 |
lineage4.2.2.2 | 3 |
lineage3 | 11 |
lineage4.3.4.2 | 8 |
lineage1.1.2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.3.1 | 1 |
lineage3.1 | 1 |
lineage4.3.2 | 1 |
lineage1.2.2.2 | 2 |
lineage4.4.1.1 | 2 |
lineage4.6.2.2 | 1 |
lineage1.1.1.1 | 2 |
lineage3.1.1 | 1 |
spoligotype | Count |
---|---|
None | 42 |
ID | Drug resistance | Lineage | Country iso2 | SRR20139558 | Pre-XDR-TB | lineage4.1.4 | None | SRR6152654 | HR-TB | lineage1.2.1.2 | ca | SRR6824491 | RR-TB | lineage4.5 | cn | ERR3276223 | Sensitive | lineage4.2.2.2 | nl | ERR2510270 | Pre-XDR-TB | lineage3 | None | ERR2516687 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR4799990 | Sensitive | lineage3 | in | SRR2101328 | Sensitive | lineage1.1.2 | None | ERR775340 | MDR-TB | lineage4.3.4.2 | pe | SRR6256990 | MDR-TB | lineage4.1.2.1 | ru | ERR3014593 | Pre-XDR-TB | lineage4.3.1 | tn | ERR4799746 | Pre-XDR-TB | lineage3 | in | ERR2510195 | MDR-TB | lineage4.3.4.2 | pe | ERR2510430 | MDR-TB | lineage3 | pk | SAMN02414884 | MDR-TB | lineage4.2.2.2 | se | ERR4797062 | Sensitive | lineage3.1 | in | ERR751607 | MDR-TB | lineage4.3.2 | pe | ERR2516682 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR2513807 | HR-TB | lineage4.5 | gb | ERR4829170 | HR-TB | lineage3 | it | ERR4799075 | MDR-TB | lineage1.2.2.2 | in | ERR2517576 | Sensitive | lineage3 | nl | SRR5341281 | Pre-XDR-TB | lineage1.2.2.2 | in | SAMN02586016 | MDR-TB | lineage4.4.1.1 | za | ERR3275940 | HR-TB | lineage1.2.1.2 | nl | SAMN02414883 | MDR-TB | lineage4.2.2.2 | se | SAMN02586051 | MDR-TB | lineage4.4.1.1 | za | ERR4828913 | Sensitive | lineage4.6.2.2 | None | ERR4819441 | HR-TB | lineage3 | gb | ERR3287312 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR4813291 | MDR-TB | lineage4.3.4.2 | pe | SRR5065439 | Sensitive | lineage1.1.1.1 | vn | ERR2446299 | Sensitive | lineage3 | nl | SRR5341405 | Pre-XDR-TB | lineage3 | in | ERR2516554 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR751593 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR3275599 | Sensitive | lineage3 | nl | ERR1023361 | Sensitive | lineage3.1.1 | None | SRR6824490 | RR-TB | lineage4.5 | cn | ERR4810594 | HR-TB | lineage4.5 | cn | SRR5341428 | Pre-XDR-TB | lineage3 | in | DRR184657 | HR-TB | lineage1.1.1.1 | vn |
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