lineage | Count |
---|---|
lineage4.8 | 4 |
lineage6.3.3 | 1 |
lineage4.4.1.1 | 1 |
lineage1.1.1.1 | 2 |
lineage4.3.2.1 | 19 |
lineage1.1.2 | 1 |
lineage1.1.3.3 | 4 |
lineage1.2.1.2 | 1 |
lineage4.3.4.2 | 2 |
lineage4.5 | 2 |
lineage3 | 2 |
lineage4.1.2.1 | 1 |
lineage1.1.3.1 | 1 |
lineage1.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 42 |
ID | Drug resistance | Lineage | Country iso2 | SRR9738508 | RR-TB | lineage4.8 | None | SRR7131240 | Sensitive | lineage4.8 | None | ERR3170446 | Sensitive | lineage6.3.3 | gh | ERR040124 | MDR-TB | lineage4.4.1.1 | ug | DRR099684 | HR-TB | lineage1.1.1.1 | None | ERR1034975 | HR-TB | lineage4.3.2.1 | za | ERR10748079 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR1034989 | HR-TB | lineage4.3.2.1 | za | ERR1034993 | MDR-TB | lineage4.3.2.1 | za | ERR4796841 | Sensitive | lineage1.1.2 | in | ERR10748098 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR10748113 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR9993263 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR7911702 | MDR-TB | lineage4.3.2.1 | za | ERR751849 | Sensitive | lineage1.1.3.3 | th | ERR752022 | Sensitive | lineage1.1.3.3 | th | ERR752093 | Sensitive | lineage1.1.3.3 | th | SRR16156711 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR12882442 | Sensitive | lineage1.2.1.2 | None | SRR16156824 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR16156734 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR16156759 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR16156715 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR16156742 | MDR-TB | lineage4.3.2.1 | None | SRR16156746 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR16156785 | MDR-TB | lineage4.3.2.1 | None | SRR16156818 | MDR-TB | lineage4.3.2.1 | None | ERR2510813 | Sensitive | lineage4.8 | None | SRR18665451 | Sensitive | lineage4.3.4.2 | None | SRR18897178 | Sensitive | lineage4.3.4.2 | None | SRR21291151 | HR-TB | lineage4.5 | None | ERR9806908 | MDR-TB | lineage4.3.2.1 | None | ERR11068987 | Pre-XDR-TB | lineage4.8 | None | ERR9806930 | MDR-TB | lineage4.3.2.1 | None | ERR2510468 | RR-TB | lineage3 | pk | SRR5073939 | HR-TB | lineage1.1.1.1 | vn | ERR2513267 | HR-TB | lineage4.5 | gb | ERR4831514 | Other | lineage3 | pk | ERR2516464 | MDR-TB | lineage4.1.2.1 | pe | SRR5709968 | MDR-TB | lineage1.1.3.3 | th | SRR6650104 | Sensitive | lineage1.1.3.1 | None | SRR6930923 | Pre-XDR-TB | lineage1.2.2.2 | None |
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