lineage | Count |
---|---|
lineage4.3.3 | 6 |
lineage4.1.1 | 3 |
lineage4.3.4.1 | 2 |
lineage3.1.2 | 1 |
lineage4.3.4.2 | 2 |
lineage3 | 3 |
lineage2.2.1 | 1 |
La1.8.1 | 24 |
lineage1.1.3 | 1 |
lineage4.3.3;lineage2.2.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage6.1.1 | 3 |
lineage4.5 | 2 |
lineage1.1.1.1 | 1 |
lineage1.1.2 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 53 |
ID | Drug resistance | Lineage | Country iso2 | SRR2100187 | HR-TB | lineage4.3.3 | None | ERR775377 | MDR-TB | lineage4.1.1 | pe | ERR2707131 | MDR-TB | lineage4.3.4.1 | cd | ERR4800277 | Sensitive | lineage3.1.2 | in | ERR2707191 | MDR-TB | lineage4.3.4.1 | cd | SRR5481426 | Other | lineage4.3.4.2 | None | ERR4829608 | Sensitive | lineage3 | None | ERR4813081 | MDR-TB | lineage4.1.1 | pe | ERR4812956 | MDR-TB | lineage4.1.1 | pe | SRR6832508 | Sensitive | lineage4.3.3 | None | ERR2503439 | Sensitive | lineage2.2.1 | fi | SRR6982023 | Sensitive | lineage4.3.3 | None | SRR8902557 | Other | La1.8.1 | None | SRR8902562 | Other | La1.8.1 | None | SRR8902561 | Other | La1.8.1 | None | SRR8902560 | Other | La1.8.1 | None | ERR2515979 | Sensitive | lineage4.3.3 | za | ERR1034630 | MDR-TB | lineage4.3.4.2 | None | ERR117615 | HR-TB | lineage4.3.3 | None | SRR8902563 | Other | La1.8.1 | None | SRR8902559 | Other | La1.8.1 | None | SRR12554455 | Other | La1.8.1 | None | ERR654965 | HR-TB | lineage4.3.3 | None | SRR11662423 | MDR-TB | lineage1.1.3 | None | SRR12554456 | Other | La1.8.1 | None | SRR12554463 | Other | La1.8.1 | None | ERR654966 | HR-TB | lineage4.3.3;lineage2.2.1 | None | SRR22251559 | Sensitive | lineage1.2.1.2.1 | None | SRR12554459 | Other | La1.8.1 | None | SRR12554454 | Other | La1.8.1 | None | SRR12554460 | Other | La1.8.1 | None | SRR12554458 | Other | La1.8.1 | None | SRR12554467 | Other | La1.8.1 | None | SRR12554461 | Other | La1.8.1 | None | SRR12554457 | Other | La1.8.1 | None | SRR12554464 | Other | La1.8.1 | None | SRR12554465 | Other | La1.8.1 | None | SRR12554466 | Other | La1.8.1 | None | SRR12554470 | Other | La1.8.1 | None | SRR12554462 | Other | La1.8.1 | None | SRR12554468 | Other | La1.8.1 | None | SRR1577831 | MDR-TB | lineage6.1.1 | None | SRR12554469 | Other | La1.8.1 | None | SRR15315955 | Pre-XDR-TB | lineage4.5 | None | SRR1577834 | MDR-TB | lineage6.1.1 | None | SRR17729355 | Sensitive | lineage1.1.1.1 | None | SRR1577820 | MDR-TB | lineage6.1.1 | None | SRR8380872 | MDR-TB | lineage1.1.2 | in | SRR26112442 | Sensitive | lineage3 | None | SRR18914184 | Other | La1.8.1 | None | SRR21276923 | Pre-XDR-TB | lineage4.5 | None | ERR038751 | MDR-TB | lineage4.1.1.3 | ug | ERR11049208 | Sensitive | lineage3 | None |
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