SRR28394232
|
MDR-TB
|
lineage4
|
None
|
SRR28393572
|
MDR-TB
|
lineage4
|
None
|
SRR21690136
|
Sensitive
|
lineage3
|
None
|
SRR16058436
|
HR-TB
|
lineage4.5
|
None
|
ERR2514106
|
Pre-XDR-TB
|
lineage3
|
gb
|
ERR7910889
|
MDR-TB
|
lineage4
|
None
|
SRR28394078
|
MDR-TB
|
lineage4
|
None
|
ERR4832053
|
HR-TB
|
lineage1.1.1.1
|
None
|
SRR1220118
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1221187
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1231810
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR9117745
|
HR-TB
|
lineage3
|
None
|
SRR28393626
|
MDR-TB
|
lineage4
|
None
|
ERR4798153
|
HR-TB
|
lineage3
|
in
|
ERR13289377
|
XDR-TB
|
lineage4.1.1.2
|
None
|
ERR13260594
|
MDR-TB
|
lineage4
|
None
|
ERR4457861
|
MDR-TB
|
lineage4
|
None
|
SRR1232079
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1232932
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR21798476
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR11252673
|
HR-TB
|
lineage4.3.2
|
None
|
SRR28498517
|
MDR-TB
|
lineage4.8
|
None
|
SRR28045492
|
XDR-TB
|
lineage1.2.2.2
|
None
|
ERR11252462
|
HR-TB
|
lineage4.3.2
|
None
|
SRR28394070
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR28393551
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR28044510
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR28393349
|
MDR-TB
|
lineage4
|
None
|
SRR28393423
|
MDR-TB
|
lineage4
|
None
|
ERR2516667
|
MDR-TB
|
lineage4
|
pe
|
ERR13252747
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR4829975
|
Pre-XDR-TB
|
lineage4.5;lineage4.9
|
pk
|
ERR751620
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR3287846
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR3287735
|
MDR-TB
|
lineage4
|
pe
|
ERR11811401
|
HR-TB
|
lineage4.3.2
|
None
|
ERR13290465
|
RR-TB
|
lineage2.2;lineage4
|
None
|
ERR11488984
|
XDR-TB
|
lineage4.3.2
|
None
|
ERR3287505
|
MDR-TB
|
lineage4
|
None
|
ERR3287558
|
MDR-TB
|
lineage4
|
None
|
SRR17234892
|
MDR-TB
|
lineage4
|
None
|
SRR28393529
|
MDR-TB
|
lineage4
|
None
|
SRR28394278
|
MDR-TB
|
lineage4
|
None
|
ERR13290462
|
RR-TB
|
lineage2.2;lineage4
|
None
|
SRR28044511
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4457792
|
HR-TB
|
lineage4
|
None
|
ERR9029867
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR1220253
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1223486
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1231812
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1225522
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1232999
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR4820155
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR2100208
|
HR-TB
|
lineage3
|
None
|
SRR28393369
|
MDR-TB
|
lineage4
|
None
|
ERR3287443
|
MDR-TB
|
lineage4
|
pe
|
ERR13266404
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR11252397
|
HR-TB
|
lineage4.3.2
|
None
|
ERR3287595
|
MDR-TB
|
lineage4
|
None
|
ERR4813603
|
MDR-TB
|
lineage4
|
None
|
SRR1232852
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR22249525
|
Sensitive
|
lineage4.1.1.1
|
None
|
SAMEA5569750
|
MDR-TB
|
lineage4
|
None
|
ERR230003
|
MDR-TB
|
lineage4.1.2.1
|
ru
|
ERR4553452
|
MDR-TB
|
lineage1.1.3.1
|
None
|
SRR29055829
|
Pre-XDR-TB
|
lineage4.1.1.2
|
None
|
SRR1180970
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4813502
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR751526
|
MDR-TB
|
lineage4
|
pe
|
SAMEA5569642
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR7496486
|
HR-TB
|
lineage1.1.1.1
|
us
|
ERR4797481
|
Pre-XDR-TB
|
lineage3
|
in
|
SRR11662628
|
MDR-TB
|
lineage2.1
|
None
|
SRR1214368
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR28394260
|
MDR-TB
|
lineage4
|
None
|
SRR1232666
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR4812060
|
HR-TB
|
lineage4
|
pe
|
ERR11488877
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR11069062
|
HR-TB
|
lineage4.8
|
None
|
ERR11489056
|
XDR-TB
|
lineage4.3.2
|
None
|
ERR3287864
|
MDR-TB
|
lineage4
|
pe
|
SAMN03246623
|
MDR-TB
|
lineage4.5
|
cn
|
ERR11050082
|
Sensitive
|
lineage3
|
None
|
ERR2179648
|
MDR-TB
|
lineage4.5
|
cn
|
SRR5065648
|
HR-TB
|
lineage1.1.1.1
|
vn
|
SRR28858605
|
MDR-TB
|
lineage4
|
None
|
SRR7069219
|
HR-TB
|
lineage3
|
None
|
SRR1228669
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR3287744
|
HR-TB
|
lineage4
|
pe
|
SRR26399999
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR29093109
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1221259
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1214087
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1220254
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1215478
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR11067563
|
Sensitive
|
lineage4.6
|
None
|
ERR11488612
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR3287527
|
MDR-TB
|
lineage4
|
None
|
ERR13264965
|
Sensitive
|
lineage4.5
|
None
|
ERR13290464
|
RR-TB
|
lineage2.2;lineage4
|
None
|
SRR29772645
|
RR-TB
|
lineage3
|
None
|
ERR11488805
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR3287555
|
MDR-TB
|
lineage4
|
None
|
ERR4457827
|
MDR-TB
|
lineage4
|
None
|
SRR1227561
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1231758
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR12117938
|
MDR-TB
|
lineage4
|
None
|
ERR11252596
|
HR-TB
|
lineage4.3.2
|
None
|
ERR5865482
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR26399874
|
Sensitive
|
lineage2.2.1
|
None
|
ERR6336721
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR29772840
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4811872
|
HR-TB
|
lineage4
|
pe
|
ERR7910890
|
MDR-TB
|
lineage4
|
None
|
SRR7068914
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4799507
|
MDR-TB
|
lineage1.1.2
|
in
|
SRR1228674
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR5865483
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR3132134
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1221157
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR279535
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR1633839
|
MDR-TB
|
lineage4.3.2.1
|
za
|
SRR22175227
|
HR-TB
|
lineage3
|
None
|
ERR9030456
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR6152744
|
HR-TB
|
lineage3
|
ca
|
ERR3287449
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR3287696
|
MDR-TB
|
lineage4
|
pe
|
ERR751601
|
MDR-TB
|
lineage4
|
pe
|
SRR21733037
|
HR-TB
|
lineage1.1.3.3
|
None
|
ERR13264900
|
HR-TB
|
lineage4.6
|
None
|
SRR1228675
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1229834
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR13285088
|
MDR-TB
|
lineage4.7;lineage4.8
|
None
|
ERR9992761
|
XDR-TB
|
lineage4.1.1.2
|
None
|
ERR12117965
|
MDR-TB
|
lineage4
|
None
|
ERR11488907
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR3105777
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
ERR4457819
|
HR-TB
|
lineage4
|
None
|
ERR7339052
|
MDR-TB
|
lineage4
|
None
|
SRR1220223
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR4457811
|
MDR-TB
|
lineage4
|
None
|
ERR751540
|
MDR-TB
|
lineage4
|
pe
|
SRR1159299
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR7496485
|
HR-TB
|
lineage1.1.1.1
|
us
|
ERR11488378
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR1214397
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1232096
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR28394044
|
MDR-TB
|
lineage4
|
None
|
SRR29016797
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR12118009
|
MDR-TB
|
lineage4
|
None
|
SRR29289109
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4815672
|
Sensitive
|
lineage1.1.2
|
gb
|
ERR1034737
|
MDR-TB
|
lineage4
|
pe
|
ERR4800083
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR2516414
|
MDR-TB
|
lineage4
|
pe
|
SRR1222411
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR11488916
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR14801815
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1232824
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR9029870
|
MDR-TB
|
lineage4
|
None
|
ERR3256175
|
HR-TB
|
lineage1.2.1.2.1
|
ph
|
SRR1215682
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
DRR188989
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR1183966
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR1223196
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR11049657
|
Sensitive
|
lineage1.1.2
|
None
|
ERR11080901
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14801817
|
HR-TB
|
lineage4.8
|
None
|
SRR28393901
|
MDR-TB
|
lineage4
|
None
|
SRR28044509
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR6982434
|
HR-TB
|
lineage4.3.2
|
None
|
SRR1214140
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR28393600
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR28393306
|
MDR-TB
|
lineage4
|
None
|
SRR28394271
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR2510330
|
Sensitive
|
lineage4.5
|
pk
|
ERR2510351
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR3287473
|
HR-TB
|
lineage4
|
pe
|
ERR751521
|
MDR-TB
|
lineage4
|
pe
|
ERR11811443
|
HR-TB
|
lineage4.3.2
|
None
|
SRR29772701
|
RR-TB
|
lineage3
|
None
|
ERR11067382
|
HR-TB
|
lineage3.1.2.1
|
None
|
ERR11068183
|
Sensitive
|
lineage4.6
|
None
|
ERR1034756
|
HR-TB
|
lineage4
|
pe
|
ERR10748420
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR17657962
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11043146
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4812485
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR11488559
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR25340901
|
Sensitive
|
lineage1.1.2
|
None
|
SRR29051175
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4178287
|
MDR-TB
|
lineage4
|
None
|
SRR6485041
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR1219241
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR4457776
|
MDR-TB
|
lineage4
|
None
|
SRR29289246
|
MDR-TB
|
lineage3
|
None
|
SRR21733019
|
Sensitive
|
lineage4.6
|
None
|
ERR13292069
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR2516548
|
MDR-TB
|
lineage4
|
pe
|
ERR2516650
|
Pre-XDR-TB
|
lineage4
|
pe
|
SAMN02419566
|
Pre-XDR-TB
|
lineage4.1.2.1
|
by
|
SRR1146278
|
MDR-TB
|
lineage2.2.1;lineage4
|
None
|
SRR1215449
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR28393689
|
MDR-TB
|
lineage4
|
None
|
ERR1213891
|
MDR-TB
|
lineage4.3.3
|
co
|
SRR13870364
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR4797713
|
HR-TB
|
lineage3
|
in
|
ERR1034755
|
MDR-TB
|
lineage4
|
pe
|
ERR4025071
|
MDR-TB
|
lineage4
|
None
|
SAMEA5569751
|
MDR-TB
|
lineage4
|
None
|
ERR2516503
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR751452
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR4820295
|
MDR-TB
|
lineage4.3.2
|
gb
|
SRR25827875
|
Pre-XDR-TB
|
lineage1.2.2.2;lineage2.2.1;lineage3
|
None
|
SRR1219053
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1221612
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR11043797
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR13260301
|
MDR-TB
|
lineage4
|
None
|
ERR4813495
|
HR-TB
|
lineage4
|
None
|
ERR13260344
|
MDR-TB
|
lineage4
|
None
|
SRR14801823
|
HR-TB
|
lineage4.8
|
None
|
ERR11488443
|
MDR-TB
|
lineage4.3.2;lineage4.3.4.2.1
|
None
|
ERR2510175
|
MDR-TB
|
lineage4
|
pe
|
ERR751486
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
SRR28394269
|
MDR-TB
|
lineage4
|
None
|
SRR1232797
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR28393848
|
MDR-TB
|
lineage4
|
None
|
ERR3148170
|
Pre-XDR-TB
|
lineage4.3.4.2
|
mx
|
ERR13260240
|
MDR-TB
|
lineage4
|
None
|
SRR28394190
|
MDR-TB
|
lineage4
|
None
|
ERR11082091
|
MDR-TB
|
lineage4
|
None
|
ERR751531
|
MDR-TB
|
lineage4
|
pe
|
SRR23310996
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR751478
|
MDR-TB
|
lineage4
|
pe
|
ERR9029844
|
MDR-TB
|
lineage4
|
None
|
SRR1222265
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR4813107
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR11488421
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR1226235
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR751516
|
MDR-TB
|
lineage4
|
pe
|
ERR775364
|
MDR-TB
|
lineage4
|
pe
|
SRR1162534
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4819779
|
Sensitive
|
lineage3
|
gb
|
SRR1163141
|
MDR-TB
|
lineage4
|
None
|
SRR1220623
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1223221
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR4796359
|
XDR-TB
|
lineage3
|
None
|
SRR28394212
|
MDR-TB
|
lineage4
|
None
|
ERR4798218
|
Sensitive
|
lineage3
|
in
|
ERR11488832
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR10869243
|
Pre-XDR-TB
|
lineage4.1.1.2
|
None
|
ERR387002
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR13285495
|
Sensitive
|
lineage3
|
None
|
SRR16088570
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR779883
|
MDR-TB
|
lineage4
|
pe
|
ERR3287445
|
MDR-TB
|
lineage4
|
pe
|
ERR2516616
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR2516220
|
MDR-TB
|
lineage4
|
be
|
SRR1231818
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1232424
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR117640
|
HR-TB
|
lineage3
|
None
|
SRR1222866
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR13291654
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
DRR034523
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR4796309
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
SRR7645919
|
HR-TB
|
lineage4.8
|
None
|
ERR11488819
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR2512812
|
HR-TB
|
lineage3
|
gb
|
SRR7069851
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4457843
|
MDR-TB
|
lineage4
|
None
|
ERR4829750
|
HR-TB
|
lineage4.6
|
it
|
ERR3287360
|
MDR-TB
|
lineage4
|
pe
|
ERR4815712
|
Sensitive
|
lineage3
|
gb
|
ERR1035325
|
Pre-XDR-TB
|
lineage4.6.4
|
br
|
ERR495066
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR7339051
|
MDR-TB
|
lineage4
|
None
|
ERR4812772
|
MDR-TB
|
lineage4
|
pe
|
SRR21710718
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR1144804
|
RR-TB
|
lineage2.2;lineage4
|
None
|
SRR1214261
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1214443
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR24256218
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4025041
|
MDR-TB
|
lineage4
|
None
|
ERR11252738
|
HR-TB
|
lineage4.3.2
|
None
|
ERR13260151
|
MDR-TB
|
lineage4
|
None
|
SRR1218657
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR4024944
|
MDR-TB
|
lineage4
|
None
|
ERR4813306
|
MDR-TB
|
lineage4
|
pe
|
SRR1222374
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR2101753
|
HR-TB
|
lineage4.3.2
|
None
|
ERR2516472
|
MDR-TB
|
lineage4
|
pe
|
ERR3287791
|
MDR-TB
|
lineage4
|
pe
|
ERR4828212
|
Sensitive
|
lineage2.2.1
|
vn
|
SRR1218488
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR21689463
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
ERR2510396
|
MDR-TB
|
lineage3
|
pk
|
ERR2516541
|
Pre-XDR-TB
|
lineage4
|
pe
|
SRR2100884
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR13290463
|
RR-TB
|
lineage2.2;lineage4
|
None
|
ERR11488374
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR28393361
|
MDR-TB
|
lineage4
|
None
|
SRR28393265
|
MDR-TB
|
lineage4
|
None
|
SRR28394268
|
MDR-TB
|
lineage4
|
None
|
ERR11252683
|
HR-TB
|
lineage4.3.2
|
None
|
ERR11252511
|
HR-TB
|
lineage4.3.2
|
None
|
SRR28393885
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR11252711
|
HR-TB
|
lineage4.3.2
|
None
|
SRR1221641
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR29081563
|
HR-TB
|
lineage4
|
None
|
ERR13283990
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR1221031
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR13591447
|
Sensitive
|
lineage4.3.2
|
None
|
ERR13260439
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR1217053
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR28393624
|
MDR-TB
|
lineage4
|
None
|
ERR13261893
|
MDR-TB
|
lineage4
|
None
|
ERR11068806
|
Sensitive
|
lineage1.1.2
|
None
|
ERR3287536
|
MDR-TB
|
lineage4
|
None
|
ERR4797311
|
XDR-TB
|
lineage2.2.1.1;lineage3
|
in
|
SRR1223519
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR4813203
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR28393599
|
MDR-TB
|
lineage4
|
None
|
ERR4831056
|
Sensitive
|
lineage4.1.1.1
|
np
|
ERR751356
|
MDR-TB
|
lineage4
|
pe
|
SRR1214226
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1226187
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR11488835
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR28045938
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR28393378
|
MDR-TB
|
lineage4
|
None
|
SRR28045232
|
Sensitive
|
lineage3
|
None
|
ERR4813898
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2513499
|
Sensitive
|
lineage3
|
gb
|
ERR2516678
|
MDR-TB
|
lineage4
|
pe
|
ERR3287597
|
MDR-TB
|
lineage4
|
pe
|
ERR11489036
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR1214763
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR502406
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR13284489
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4813115
|
MDR-TB
|
lineage4
|
None
|
ERR11067326
|
Sensitive
|
lineage4.5
|
None
|
ERR4812883
|
MDR-TB
|
lineage4.9
|
pe
|
ERR13284322
|
MDR-TB
|
lineage4
|
None
|
SRR6824300
|
MDR-TB
|
lineage4.5
|
cn
|
ERR4811935
|
HR-TB
|
lineage4
|
pe
|
ERR2516509
|
MDR-TB
|
lineage4
|
pe
|
SRR28393318
|
MDR-TB
|
lineage4
|
None
|
ERR775321
|
MDR-TB
|
lineage4
|
pe
|
SRR1226993
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR751488
|
MDR-TB
|
lineage4
|
pe
|
SRR7496483
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR11044261
|
MDR-TB
|
lineage4.7;lineage4.8
|
None
|
SRR1163300
|
MDR-TB
|
lineage4
|
None
|
ERR751414
|
MDR-TB
|
lineage4
|
None
|
ERR11069064
|
Sensitive
|
lineage4.8
|
None
|
SRR7069802
|
Other
|
lineage3
|
None
|
SRR28170773
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
ERR13260512
|
MDR-TB
|
lineage4
|
None
|
ERR11067720
|
HR-TB
|
lineage4.8.1
|
None
|
ERR9125635
|
HR-TB
|
lineage4.5
|
None
|
SRR28351598
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1215686
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR25827356
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage2.2.1.2;lineage3
|
None
|
SRR1222199
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR4457925
|
MDR-TB
|
lineage4
|
None
|
SRR1226230
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR4457924
|
MDR-TB
|
lineage4
|
None
|
ERR4813333
|
MDR-TB
|
lineage4
|
None
|
ERR4813465
|
HR-TB
|
lineage4
|
pe
|
SRR6152883
|
MDR-TB
|
lineage1.2.1.2.1
|
ca
|
SRR6511640
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR11488665
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR13260390
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR15217980
|
HR-TB
|
lineage4
|
None
|
ERR2510234
|
MDR-TB
|
lineage4
|
pe
|
ERR270784
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR14801396
|
MDR-TB
|
lineage4.8
|
None
|
ERR751411
|
MDR-TB
|
lineage4
|
pe
|
ERR4813549
|
MDR-TB
|
lineage4
|
None
|
SRR25827363
|
MDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR1218487
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR3287721
|
MDR-TB
|
lineage4
|
pe
|
ERR4178215
|
HR-TB
|
lineage4
|
None
|
ERR4457805
|
MDR-TB
|
lineage4
|
None
|
ERR13260063
|
MDR-TB
|
lineage3
|
None
|
ERR4024541
|
HR-TB
|
lineage4
|
None
|
ERR6358849
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR4812681
|
MDR-TB
|
lineage4
|
pe
|
ERR2864224
|
MDR-TB
|
lineage4.3.2
|
pt
|
ERR751447
|
MDR-TB
|
lineage4
|
pe
|
SRR1222936
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1229622
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1222405
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1232522
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR2516521
|
MDR-TB
|
lineage4
|
nl
|
SRR1214388
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR29017430
|
MDR-TB
|
lineage1.1.3.1
|
None
|
ERR2516458
|
MDR-TB
|
lineage4
|
pe
|
SRR28393997
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR11488609
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR751465
|
MDR-TB
|
lineage4
|
pe
|
ERR4799738
|
XDR-TB
|
lineage3
|
in
|
SRR28044625
|
HR-TB
|
lineage1.1.2
|
None
|
SRR28393954
|
MDR-TB
|
lineage4
|
None
|
SRR28393801
|
MDR-TB
|
lineage4
|
None
|
SRR1214086
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR3287557
|
MDR-TB
|
lineage4
|
None
|
SRR1213958
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1214148
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1233405
|
RR-TB
|
lineage4.1.2.1
|
None
|