lineage | Count |
---|---|
lineage4.1.2.1;lineage4.3.3 | 1 |
lineage4.3.3 | 22 |
lineage4.8 | 1 |
lineage4.3.4.2;lineage4.6.1.1 | 2 |
lineage4.3.4.2 | 23 |
lineage2.2.2 | 4 |
lineage6.3.1 | 1 |
lineage3 | 2 |
lineage3.1.2.1;lineage4.3.4.2 | 2 |
lineage4.3.4.2.1 | 1 |
lineage1.2.2.1 | 1 |
lineage4.5 | 3 |
lineage4.4.1.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 66 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR22461666 | HR-TB | lineage4.1.2.1;lineage4.3.3 | None |
ERR4812128 | Sensitive | lineage4.3.3 | None |
ERR751464 | Pre-XDR-TB | lineage4.8 | pe |
ERR1199139 | Sensitive | lineage4.3.4.2;lineage4.6.1.1 | ug |
ERR4813242 | Sensitive | lineage4.3.3 | pe |
ERR4812503 | Sensitive | lineage4.3.3 | pe |
ERR4812412 | Sensitive | lineage4.3.3 | pe |
ERR4812354 | Sensitive | lineage4.3.3 | pe |
ERR987754 | MDR-TB | lineage4.3.4.2 | None |
SRR29050941 | HR-TB | lineage2.2.2 | None |
ERR1215461 | MDR-TB | lineage6.3.1 | gh |
ERR13264937 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR4813537 | Sensitive | lineage4.3.3 | None |
SRR1049610 | MDR-TB | lineage4.3.4.2 | None |
SRR1049611 | MDR-TB | lineage4.3.4.2 | None |
ERR13267458 | Sensitive | lineage4.3.3 | None |
SRR29016754 | HR-TB | lineage2.2.2 | None |
SRR29126498 | Sensitive | lineage4.3.3 | None |
SAMN02381003 | MDR-TB | lineage4.3.4.2 | ug |
SRR1062893 | MDR-TB | lineage4.3.4.2 | None |
ERR987699 | HR-TB | lineage4.3.4.2 | None |
SRR28046328 | Sensitive | lineage3 | None |
SAMN02381050 | HR-TB | lineage4.3.4.2 | ug |
ERR1193675 | HR-TB | lineage4.3.4.2 | ug |
ERR1193705 | Sensitive | lineage4.3.3 | pe |
ERR038736 | MDR-TB | lineage4.3.4.2 | ug |
ERR4811914 | Sensitive | lineage4.3.3 | pe |
ERR4812393 | Sensitive | lineage4.3.3 | pe |
ERR4813239 | Sensitive | lineage4.3.3 | pe |
SRR1049750 | HR-TB | lineage4.3.4.2 | None |
SRR1140681 | MDR-TB | lineage3.1.2.1;lineage4.3.4.2 | None |
ERR212127 | HR-TB | lineage4.3.4.2.1 | mw |
ERR987741 | Sensitive | lineage4.3.4.2;lineage4.6.1.1 | None |
ERR2512463 | Sensitive | lineage3 | gb |
SRR1140638 | HR-TB | lineage4.3.4.2 | None |
ERR6866477 | Sensitive | lineage4.3.3 | None |
ERR6866478 | Sensitive | lineage4.3.3 | None |
ERR6866479 | Sensitive | lineage4.3.3 | None |
ERR987771 | HR-TB | lineage4.3.4.2 | None |
SRR29126161 | Sensitive | lineage4.3.3 | None |
SRR7535036 | HR-TB | lineage4.3.4.2 | None |
ERR987698 | HR-TB | lineage4.3.4.2 | None |
SRR7535042 | HR-TB | lineage4.3.4.2 | None |
SRR1062940 | HR-TB | lineage4.3.4.2 | None |
ERR987695 | HR-TB | lineage4.3.4.2 | None |
SRR1140702 | MDR-TB | lineage4.3.4.2 | None |
ERR11044204 | Sensitive | lineage1.2.2.1 | None |
ERR4828693 | HR-TB | lineage2.2.2 | vn |
ERR4828684 | HR-TB | lineage2.2.2 | vn |
ERR4811242 | Sensitive | lineage4.5 | None |
ERR4811269 | Sensitive | lineage4.5 | None |
ERR4811270 | Sensitive | lineage4.5 | None |
SRR6785438 | Sensitive | lineage4.3.3 | None |
SRR7535043 | HR-TB | lineage4.3.4.2 | None |
SRR7535041 | HR-TB | lineage4.3.4.2 | None |
ERR4811876 | Pre-XDR-TB | lineage4.4.1.1 | pe |
SRR27450508 | Sensitive | lineage1.2.1.2.1 | None |
ERR4813035 | Sensitive | lineage4.3.3 | None |
ERR987734 | HR-TB | lineage4.3.4.2 | None |
ERR4812662 | Sensitive | lineage4.3.3 | None |
SRR30182500 | HR-TB | lineage3.1 | None |
ERR4813267 | Sensitive | lineage4.3.3 | pe |
SRR1049749 | HR-TB | lineage4.3.4.2 | None |
ERR13261866 | Sensitive | lineage4.3.3 | None |
SRR1062883 | MDR-TB | lineage3.1.2.1;lineage4.3.4.2 | None |
ERR2514854 | Sensitive | lineage4.3.3 | None |