lineage | Count |
---|---|
lineage4.1.1;lineage4.1.2.1 | 2 |
lineage1.1.2 | 2 |
lineage3 | 11 |
lineage4.3.4.1 | 20 |
lineage1.1.3.1 | 2 |
lineage4.8 | 1 |
lineage1.2.1.2.1 | 3 |
lineage4.3.2 | 1 |
lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 43 |
ID | Drug resistance | Lineage | Country iso2 | ERR4178219 | Pre-XDR-TB | lineage4.1.1;lineage4.1.2.1 | None | SRR29289143 | MDR-TB | lineage1.1.2 | None | SRR29289332 | Pre-XDR-TB | lineage3 | None | ERR7363120 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4819736 | Pre-XDR-TB | lineage3 | gb | ERR4813878 | MDR-TB | lineage4.3.4.1 | br | SRR19267900 | HR-TB | lineage1.1.3.1 | None | ERR1035342 | MDR-TB | lineage4.3.4.1 | br | ERR4813966 | MDR-TB | lineage4.3.4.1 | br | ERR2513160 | Pre-XDR-TB | lineage3 | gb | ERR1035313 | MDR-TB | lineage4.3.4.1 | br | ERR4816776 | Other | lineage3 | None | ERR1465901 | HR-TB | lineage4.8 | au | ERR4813805 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR4813801 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR4813770 | MDR-TB | lineage4.3.4.1 | br | ERR4820883 | Other | lineage3 | None | ERR4821998 | Other | lineage3 | gb | ERR4813942 | MDR-TB | lineage4.3.4.1 | br | ERR4813870 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4813894 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR21689573 | Other | lineage1.2.1.2.1 | None | ERR2510647 | Pre-XDR-TB | lineage3 | pk | ERR13292582 | MDR-TB | lineage3 | None | ERR1035330 | MDR-TB | lineage4.3.4.1 | br | SRR28044716 | Other | lineage3 | None | ERR4813932 | MDR-TB | lineage4.3.4.1 | br | ERR4423621 | MDR-TB | lineage4.3.2 | None | SRR16370649 | HR-TB | lineage1.1.3.1 | None | ERR4813949 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR6865775 | Pre-XDR-TB | lineage4.1.1;lineage4.1.2.1 | None | SRR29289128 | MDR-TB | lineage3 | None | SRR22424811 | HR-TB | lineage1.1.2 | None | ERR2653139 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813821 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR1035280 | MDR-TB | lineage4.3.4.1 | br | ERR4813859 | MDR-TB | lineage4.3.4.1 | br | ERR13285538 | Other | lineage1.2.1.2.1 | None | ERR1035357 | MDR-TB | lineage4.3.4.1 | br | SRR7070080 | Pre-XDR-TB | lineage3 | None | ERR7902744 | HR-TB | lineage1.2.1.2.1 | None | ERR7363053 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4813808 | Pre-XDR-TB | lineage4.3.4.1 | br |
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