lineage | Count |
---|---|
lineage4.3.2 | 2 |
lineage4.3.4.2 | 9 |
lineage4.6.2.2 | 5 |
lineage2.2.1 | 11 |
lineage3.1.2 | 9 |
lineage4.4.1.1 | 5 |
lineage4.1.2.1 | 1 |
lineage3.1.3 | 5 |
lineage4.8 | 3 |
lineage3 | 5 |
lineage4 | 2 |
lineage1.2.1.2.1 | 4 |
lineage1.2.2.2 | 2 |
lineage1.1.1.1 | 2 |
lineage2.2.1.1 | 1 |
lineage1.1.2 | 1 |
lineage4.1.1.3 | 1 |
lineage1.1.1 | 1 |
lineage1.1.3.1 | 2 |
lineage2.2.2 | 1 |
lineage1.2.1.2 | 1 |
lineage4.5 | 1 |
lineage4.4.2 | 2 |
La1.8.1 | 1 |
spoligotype | Count |
---|---|
None | 77 |
ID | Drug resistance | Lineage | Country iso2 | ERR6866302 | Sensitive | lineage4.3.2 | None | ERR4553832 | MDR-TB | lineage4.3.4.2 | None | ERR8774275 | RR-TB | lineage4.6.2.2 | None | ERR13266150 | Pre-XDR-TB | lineage2.2.1 | None | ERR270739 | Pre-XDR-TB | lineage3.1.2 | None | SRR22175236 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830731 | MDR-TB | lineage4.4.1.1 | dz | ERR4799160 | Pre-XDR-TB | lineage2.2.1 | in | SRR29124257 | MDR-TB | lineage4.1.2.1 | None | ERR023742 | Sensitive | lineage3.1.3 | None | ERR4830742 | MDR-TB | lineage4.4.1.1 | dz | SRR13591338 | Sensitive | lineage4.8 | None | ERR4195479 | Sensitive | lineage3 | None | SRR29341508 | Pre-XDR-TB | lineage3 | None | ERR270752 | Pre-XDR-TB | lineage3.1.2 | None | ERR13261938 | Pre-XDR-TB | lineage4 | None | SRR21676931 | Sensitive | lineage1.2.1.2.1 | None | ERR13388691 | HR-TB | lineage1.2.2.2 | None | ERR4553427 | MDR-TB | lineage4.3.4.2 | None | SRR2100854 | Pre-XDR-TB | lineage3.1.2 | None | ERR4822371 | MDR-TB | lineage2.2.1 | None | SRR13591349 | Sensitive | lineage4.8 | None | SRR29052713 | Sensitive | lineage1.2.1.2.1 | None | SRR5065603 | HR-TB | lineage1.1.1.1 | vn | ERR4797504 | Pre-XDR-TB | lineage2.2.1 | in | ERR4813660 | MDR-TB | lineage4 | None | ERR9121160 | Sensitive | lineage3 | None | DRR184621 | Sensitive | lineage1.1.1.1 | None | SRR25827312 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4423645 | RR-TB | lineage4.6.2.2 | None | ERR11082949 | HR-TB | lineage1.2.2.2 | None | SRR6797369 | Sensitive | lineage3 | None | ERR4829156 | Sensitive | lineage4.6.2.2 | ng | DRR185094 | Sensitive | lineage4.8 | vn | SRR16370342 | HR-TB | lineage4.4.1.1 | None | SRR25827535 | Pre-XDR-TB | lineage2.2.1 | None | SRR12882696 | Sensitive | lineage1.1.2 | None | ERR4812059 | Sensitive | lineage4.3.2 | pe | ERR2514155 | HR-TB | lineage4.1.1.3 | gb | ERR4800588 | Pre-XDR-TB | lineage2.2.1 | in | SRR29017091 | MDR-TB | lineage4.3.4.2 | None | SRR2099976 | MDR-TB | lineage3.1.2 | None | ERR4799876 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827722 | Pre-XDR-TB | lineage2.2.1 | None | ERR4423644 | MDR-TB | lineage4.6.2.2 | None | SRR18213857 | Pre-XDR-TB | lineage3.1.2 | None | SRR29017044 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR28858460 | Sensitive | lineage1.2.1.2.1 | None | ERR4820439 | Sensitive | lineage1.1.1 | gb | SRR6797602 | Sensitive | lineage1.1.3.1 | None | SRR29052900 | HR-TB | lineage4.4.1.1 | None | ERR270753 | Pre-XDR-TB | lineage3.1.2 | None | ERR257889 | Sensitive | lineage3.1.3 | None | ERR4830728 | MDR-TB | lineage4.4.1.1 | dz | SRR21691085 | Sensitive | lineage3.1.3 | None | ERR3256141 | HR-TB | lineage1.2.1.2.1 | ph | SRR25827662 | Sensitive | lineage3 | None | SRR2100855 | Pre-XDR-TB | lineage3.1.2 | None | SRR6797489 | Sensitive | lineage1.1.3.1 | None | ERR4553813 | MDR-TB | lineage4.3.4.2 | None | SRR29017316 | MDR-TB | lineage4.3.4.2 | None | SRR29017521 | MDR-TB | lineage4.3.4.2 | None | ERR13267082 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774274 | MDR-TB | lineage4.6.2.2 | None | SRR15368998 | Sensitive | lineage2.2.2 | None | SRR21727758 | HR-TB | lineage1.2.1.2 | None | ERR11050509 | HR-TB | lineage4.5 | None | ERR11069046 | MDR-TB | lineage4.4.2 | None | DRR130160 | MDR-TB | lineage2.2.1 | None | ERR4553809 | MDR-TB | lineage4.3.4.2 | None | SRR7068921 | MDR-TB | lineage4.3.4.2 | None | ERR13284437 | MDR-TB | lineage4.4.2 | None | SRR1791739 | Other | La1.8.1 | None | ERR3276289 | Sensitive | lineage3.1.3 | nl | ERR023745 | Sensitive | lineage3.1.3 | nl | ERR270686 | Pre-XDR-TB | lineage3.1.2 | None | ERR2510591 | MDR-TB | lineage3.1.2 | pk |
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