lineage | Count |
---|---|
lineage1.1.2 | 14 |
lineage4.8 | 7 |
lineage1.1.1.1 | 5 |
lineage2.2.1;lineage4.2.2 | 1 |
lineage1.1.3.2 | 3 |
lineage4.1.2.1 | 9 |
lineage3 | 20 |
lineage1.2.2.2 | 1 |
lineage4.2.2.2 | 2 |
lineage4.6.1.1 | 2 |
La1.4 | 5 |
lineage2.2.1 | 1 |
lineage4.4.2 | 7 |
lineage3.1.2 | 2 |
lineage2.1 | 3 |
lineage4.1.4 | 1 |
lineage4.4.1.1 | 2 |
lineage3.1.2.1 | 2 |
lineage1.2.1.1 | 2 |
lineage3.1.1 | 3 |
lineage1.2.1.2.1 | 3 |
lineage5.3 | 1 |
lineage4.2.2 | 3 |
lineage1.1.1 | 2 |
lineage1.2.1.2 | 1 |
lineage4 | 1 |
lineage1.1.2;lineage4 | 1 |
lineage4.3.4.2 | 1 |
spoligotype | Count |
---|---|
None | 105 |
ID | Drug resistance | Lineage | Country iso2 | SRR10040337 | MDR-TB | lineage1.1.2 | None | ERR2510722 | MDR-TB | lineage4.8 | it | ERR4797386 | Sensitive | lineage1.1.2 | in | ERR4817836 | Sensitive | lineage1.1.2 | None | SRR28045934 | MDR-TB | lineage1.1.2 | None | ERR4828294 | Sensitive | lineage1.1.1.1 | vn | SRR12062502 | MDR-TB | lineage2.2.1;lineage4.2.2 | None | SRR1173674 | HR-TB | lineage1.1.3.2 | None | SRR26399598 | Sensitive | lineage4.1.2.1 | None | ERR4799207 | Pre-XDR-TB | lineage3 | None | SRR1146268 | Sensitive | lineage3 | None | ERR2984793 | MDR-TB | lineage1.2.2.2 | None | ERR4828920 | Sensitive | lineage4.8 | None | SRR1166929 | Sensitive | lineage3 | None | ERR2513696 | Sensitive | lineage1.1.2 | gb | SRR6153009 | HR-TB | lineage4.2.2.2 | ca | ERR6358869 | MDR-TB | lineage4.6.1.1 | None | SRR7068928 | HR-TB | lineage3 | None | SRR16278292 | Other | La1.4 | None | SRR5073693 | Sensitive | lineage4.1.2.1 | None | SRR21690294 | Sensitive | lineage4.8 | None | DRR130062 | RR-TB | lineage2.2.1 | None | SRR6964670 | MDR-TB | lineage1.1.2 | None | SRR16058642 | Other | lineage1.1.2 | None | SRR12062494 | Pre-XDR-TB | lineage4.4.2 | None | SRR5067223 | HR-TB | lineage1.1.1.1 | vn | SRR25340819 | Sensitive | lineage3.1.2 | None | ERR4829418 | Sensitive | lineage3 | it | SRR5065525 | Sensitive | lineage1.1.1.1 | vn | SRR5067683 | HR-TB | lineage2.1 | vn | SRR12062529 | Pre-XDR-TB | lineage4.4.2 | None | ERR3287593 | HR-TB | lineage4.1.4 | None | SRR5065416 | Sensitive | lineage4.4.1.1 | vn | SRR10726044 | MDR-TB | lineage1.1.2 | None | SRR21733005 | Sensitive | lineage3.1.2.1 | None | SRR3105730 | MDR-TB | lineage4.8 | None | SRR10040157 | Pre-XDR-TB | lineage4.4.2 | None | SAMN02599109 | HR-TB | lineage1.1.3.2 | in | SRR2100266 | Sensitive | lineage1.2.1.1 | None | ERR4799775 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR117706 | Sensitive | lineage1.2.1.1 | None | ERR2446288 | Sensitive | lineage3.1.1 | nl | ERR2653111 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR12062492 | Pre-XDR-TB | lineage4.4.2 | None | ERR4799766 | HR-TB | lineage1.1.2 | in | SRR28409403 | Sensitive | lineage1.2.1.2.1 | None | ERR1034607 | MDR-TB | lineage1.1.2 | pk | ERR4829936 | HR-TB | lineage1.1.2 | pk | ERR4817862 | HR-TB | lineage2.1 | gb | SRR21710722 | Other | lineage5.3 | None | SRR1162875 | Sensitive | lineage3 | None | ERR9125504 | Other | lineage1.1.2 | None | ERR3287628 | HR-TB | lineage4.2.2 | pe | SRR10809029 | HR-TB | lineage4.1.2.1 | None | ERR4798661 | Sensitive | lineage3.1.2 | in | ERR768025 | HR-TB | lineage1.1.1 | th | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4819831 | Sensitive | lineage1.2.1.2.1 | None | SRR12062501 | MDR-TB | lineage4.2.2 | None | SRR22251324 | HR-TB | lineage3 | None | SRR16278282 | Other | La1.4 | None | SRR12062528 | Pre-XDR-TB | lineage4.4.2 | None | SRR16278249 | Other | La1.4 | None | ERR2513964 | HR-TB | lineage3 | gb | ERR2653179 | MDR-TB | lineage4.1.2.1 | None | SRR26399820 | Sensitive | lineage1.1.1.1 | None | ERR553386 | RR-TB | lineage4.8 | None | SRR10040440 | MDR-TB | lineage4.4.2 | None | ERR688039 | MDR-TB | lineage1.1.2 | None | ERR550956 | HR-TB | lineage1.2.1.2 | de | SAMN02414929 | Sensitive | lineage3 | se | ERR2517404 | Sensitive | lineage3.1.1 | nl | ERR775761 | Sensitive | lineage2.1 | th | ERR4815623 | Sensitive | lineage1.1.2 | None | SRR16278224 | Other | La1.4 | None | SRR21690831 | Sensitive | lineage3 | None | ERR3287617 | HR-TB | lineage4.2.2 | pe | ERR3276103 | Sensitive | lineage3 | nl | SRR22424739 | Pre-XDR-TB | lineage3 | None | SRR7829589 | MDR-TB | lineage4.8 | None | ERR11067278 | Sensitive | lineage4.8 | None | ERR4796392 | Pre-XDR-TB | lineage3 | in | SRR28351467 | Pre-XDR-TB | lineage3 | None | SRR28498551 | Sensitive | lineage4.1.2.1 | None | SRR1173807 | HR-TB | lineage1.1.3.2 | None | ERR4798012 | Pre-XDR-TB | lineage3 | in | SRR1144779 | Sensitive | lineage3 | None | ERR4797025 | Pre-XDR-TB | lineage3 | in | SRR6964656 | MDR-TB | lineage3 | None | SRR25827736 | XDR-TB | lineage3 | None | ERR2516176 | MDR-TB | lineage4 | be | ERR3275574 | Sensitive | lineage3.1.1 | nl | ERR7361930 | HR-TB | lineage1.1.1 | None | SRR6397701 | HR-TB | lineage1.2.1.2.1 | ca | ERR2653055 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR24222941 | Sensitive | lineage4.1.2.1 | None | SRR18593216 | Pre-XDR-TB | lineage1.1.2;lineage4 | None | SRR6832479 | Sensitive | lineage4.1.2.1 | None | ERR6358868 | MDR-TB | lineage4.6.1.1 | None | ERR2653199 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR16278266 | Other | La1.4 | None | ERR4828174 | Sensitive | lineage1.1.1.1 | vn | SRR5067392 | Sensitive | lineage4.4.1.1 | vn | ERR4797795 | Pre-XDR-TB | lineage3 | in |
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